RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 NKX6-3A6NJ46 265 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 MEF2BQ02080 365 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 ACOT6Q3I5F7 207 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 FFAR4Q5NUL3 377 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 SEM1Q6ZVN7 128 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 LYG1Q8N1E2 194 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 PRR7Q8TB68 274 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 HSPB9Q9BQS6 159 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 DUSP13Q9UII6 198 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 CHRNA7P36544 502 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 ACSF3Q4G176 576 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 C1orf229Q6ZS94 237 aaPredicted RBP8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 Q8N7P7 452 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 OR10P1Q8NGE3 313 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 OR10G9Q8NGN4 311 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 OR10G7Q8NGN6 311 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 CORO2AQ92828 525 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 STARD4Q96DR4 205 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 TMEM147Q9BVK8 224 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
CLSTN1-203ENST00000435891 IGLV1-44P01699 117 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 PRDX2P32119 198 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RND2P52198 227 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF134P52741 427 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 PNRC1Q12796 327 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 SMIM21Q3B7S5 101 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF718Q3SXZ3 478 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 FAM201AQ5SY85 155 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 BAGE3Q86Y29 109 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 BAGE2Q86Y30 109 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RPRMLQ8N4K4 120 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNRF1Q8ND25 227 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 CMTM2Q8TAZ6 248 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 ZCCHC14Q8WYQ9 949 aaKnown RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 P2RX4Q99571 388 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF71Q9NQZ8 489 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 C15orf62A8K5M9 175 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 HSBP1L1C9JCN9 74 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 GALR2O43603 387 aaPredicted RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 GCH1P30793 250 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RIPPLY3P57055 190 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RPL39P5Q59GN2 51 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 STPG4Q8N801 248 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 DSCAMO60469 2012 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 RAB29O14966 203 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 FCGR3BO75015 233 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 OR2T10Q8NGZ9 312 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 LEAP2Q969E1 77 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 NCOR1P1Q9H4R4 102 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 PLSCR4Q9NRQ2 329 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 TIMM9Q9Y5J7 89 aa8.63□□□□□ -1.03
CLSTN1-203ENST00000435891 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 CDC34P49427 236 aaPredicted RBP8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 SELENOTP62341 195 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 BSXQ3C1V8 233 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF292O60281 2723 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 CGAP01215 116 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 FTH1P19P0C7X4 201 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 DEFB109BQ30KR1 87 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 IGFL2Q6UWQ7 119 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 GCSAMQ8N6F7 178 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 PARLQ9H300 379 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 KIR2DL5BA0A0G2JN68 375 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 KIR2DL5BA0A0G2JPC4 375 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 CTXND1A0A1B0GTU2 59 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 NPPCP23582 126 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 RPL23P62829 140 aaKnown RBP8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 FAM78BQ5VT40 261 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 DUX4L9Q6RFH8 374 aaPredicted RBP8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 TMEM108Q6UXF1 575 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 KIR2DL5AQ8N109 375 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 C1orf162Q8NEQ5 155 aaPredicted RBP8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 OR4F5Q8NH21 305 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 OR4F4Q96R69 305 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 TMEM242Q9NWH2 141 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 GNG12Q9UBI6 72 aa8.62□□□□□ -1.03
CLSTN1-203ENST00000435891 SPTBN2O15020 2390 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 TRAV38-1A0A0B4J264 116 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 PAGE4O60829 102 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 ZNF83P51522 516 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 MORN2Q502X0 79 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 MBNL2Q5VZF2 373 aaKnown RBP8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 SELENOKQ9Y6D0 94 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 TRAV17A0A0B4J275 112 aa8.61□□□□□ -1.03
CLSTN1-203ENST00000435891 SPINT2O43291 252 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms