RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 UBE2UQ5VVX9 321 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 BTNL8Q6UX41 500 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 SPAG16Q8N0X2 631 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 OR4A5Q8NH83 315 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 SECTM1Q8WVN6 248 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 CXorf58Q96LI9 332 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 HRASLSQ9HDD0 168 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 BET1LQ9NYM9 111 aa11.34□□□□□ -0.59
CSNK1E-208ENST00000431611 PLECQ15149 4684 aaKnown RBP11.33□□□□□ -0.59
CSNK1E-208ENST00000431611 LOC102724200A0A096LPH7 203 aaPredicted RBP11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 FCGR2CP31995 323 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 GABARAPL2P60520 117 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 MSMO1Q15800 293 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 TIMM50Q3ZCQ8 353 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 TM4SF20Q53R12 229 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 ZBTB34Q8NCN2 500 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 BEST4Q8NFU0 473 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 OR13F1Q8NGS4 319 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 MARC2Q969Z3 335 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 RHBDL2Q9NX52 303 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 SSR3Q9UNL2 185 aa11.33□□□□□ -0.6
CSNK1E-208ENST00000431611 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 PTHLHP12272 177 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 GPR183P32249 361 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 OR2B8PP59922 312 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 UNQ9165/PRO28630Q6UXU0 137 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 RBPMS2Q6ZRY4 209 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 GVQW1Q8N7I0 195 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 RAB26Q9ULW5 256 aa11.32□□□□□ -0.6
CSNK1E-208ENST00000431611 SULT1C2O00338 296 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 HPRT1P00492 218 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 PPYP01298 95 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 TAS2R31P59538 309 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 CATR1Q13166 79 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 PLET1Q6UQ28 207 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 HOGA1Q86XE5 327 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 COMMD5Q9GZQ3 224 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 SLC5A7Q9GZV3 580 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 THYN1Q9P016 225 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 UFC1Q9Y3C8 167 aa11.31□□□□□ -0.6
CSNK1E-208ENST00000431611 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 IGHV3-35A0A0C4DH35 117 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 IGLC7A0M8Q6 106 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 UPK2O00526 184 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 NQO2P16083 231 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 SDC2P34741 201 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 SCAND1P57086 179 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 FXYD4P59646 89 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 MXD1Q05195 221 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 ETV7Q9Y603 341 aa11.3□□□□□ -0.6
CSNK1E-208ENST00000431611 FCER2P06734 321 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 CLEC2LP0C7M8 214 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 ZNF773Q6PK81 442 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 OR2C3Q8N628 320 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 TMEM140Q9NV12 185 aa11.29□□□□□ -0.6
CSNK1E-208ENST00000431611 A0A0A6YYH2 397 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 A6NJ64 397 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 CYB5BO43169 146 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 TGOLN2O43493 480 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 IDNKQ5T6J7 187 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 ZNF818PQ6ZRF7 136 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 DMBX1Q8NFW5 382 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 CD300LFQ8TDQ1 290 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 VN1R17PQ8TDU5 208 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 GIMAP1Q8WWP7 306 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 QTRT1Q9BXR0 403 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 ZNF436Q9C0F3 470 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 AUNIPQ9H7T9 357 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
CSNK1E-208ENST00000431611 ALMS1Q8TCU4 4167 aa11.27□□□□□ -0.6
CSNK1E-208ENST00000431611 CXorf65A6NEN9 183 aa11.27□□□□□ -0.61
CSNK1E-208ENST00000431611 S1PR2O95136 353 aa11.27□□□□□ -0.61
CSNK1E-208ENST00000431611 FGF2P09038 288 aa11.27□□□□□ -0.61
CSNK1E-208ENST00000431611 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms