RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ZNF708P17019 499 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPCDR1Q9BY65 106 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 FBXL7Q9UJT9 491 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 TMEM101Q96IK0 257 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 TEX45Q8NA69 505 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ITLN2Q8WWU7 325 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 M0R381 172 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ERVH48-1M5A8F1 160 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 IFI27L2Q9H2X8 130 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 C12orf77C9JDV5 145 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 EMP1P54849 157 aa15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 PARD6GQ9BYG4 376 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF28-203ENST00000426542 ARID1AO14497 2285 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 WDR82Q6UXN9 313 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TRAV24A0A0B4J272 114 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB13A6NJU9 1138 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB4C9JG80 1138 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 C1QTNF12Q5T7M4 302 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TNFRSF18Q9Y5U5 241 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGFBP2P18065 325 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TFF3Q07654 80 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 TMEM170BQ5T4T1 132 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM216BQ8N7L0 139 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF646O15015 1829 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 CBLN1P23435 193 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 ASIPP42127 132 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 NUTF2P61970 127 aaKnown RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 HIST1H2BAQ96A08 127 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 PSMG3Q9BT73 122 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 CGAP01215 116 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 PAPPA-AS1Q5QFB9 102 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 DPM3Q9P2X0 92 aa15.19■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A0G2JMM0 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PPB8 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PRS3 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 KIR3DP1A8MWS1 328 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PROB1E7EW31 1015 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PPP1R27Q86WC6 154 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL4A5P29400 1685 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 C18orf15Q96N68 181 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PLSCR2Q9NRY7 297 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGKV1D-43A0A0B4J1Z2 117 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ATP5IP56385 69 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 TM4SF5O14894 197 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZXDCQ2QGD7 858 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 NHLRC3Q5JS37 347 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 DUX3Q96PT4 197 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 ALKBH7Q9BT30 221 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL4A1P02462 1669 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 PMCHL2Q9BQD1 86 aa15.18■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21A0A0G2JKD1 596 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21A0A140T8X8 626 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 C17orf98A8MV24 154 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF506Q5JVG8 444 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MUC21Q5SSG8 566 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 OR13A1Q8NGR1 328 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 OSR1Q8TAX0 266 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB9F8W1W9 429 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NPIPB7O75200 414 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 NBEAP1P0C6P0 100 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 MARVELD3Q96A59 401 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 THSD7AQ9UPZ6 1657 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 DNAL4O96015 105 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 DDTP30046 118 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 GPR183P32249 361 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 FOXA3P55318 350 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 CA7P43166 264 aa15.17■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV2OR16-5A0A0B4J2B6 119 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CLEC19AQ6UXS0 136 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 NEU4Q8WWR8 484 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 ARPC1AQ92747 370 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 GP6Q9HCN6 339 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CBLN4Q9NTU7 201 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CSRP2Q16527 193 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 CDX1P47902 265 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF414Q96IQ9 312 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 PRELID3AQ96N28 172 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 TM2D1Q9BX74 207 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 TRAV8-6A0A0B4J262 113 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL11A1P12107 1806 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 A0A1W2PRX2 142 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM168AQ92567 244 aa15.16■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV3OR16-8A0A075B7F1 116 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RNASE4P34096 147 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RTN4RL2Q86UN3 420 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 MRPL20Q9BYC9 149 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 H7C1H1 209 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 TTC32Q5I0X7 151 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RCC1LQ96I51 464 aaKnown RBP15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 SMIM13P0DJ93 91 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 IGHV1-2P23083 117 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 CCDC88CQ9P219 2028 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 EFEMP2O95967 443 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 FAM57AQ8TBR7 257 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 RPRMQ9NS64 109 aa15.15■□□□□ 0.02
ARHGEF28-203ENST00000426542 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms