RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 FOXA2Q9Y261 457 aaPredicted RBP14.2□□□□□ -0.14
SYNGAP1-202ENST00000418600 GCGP01275 180 aa14.2□□□□□ -0.14
SYNGAP1-202ENST00000418600 MAS1LP35410 378 aa14.2□□□□□ -0.14
SYNGAP1-202ENST00000418600 ASPHD2Q6ICH7 369 aa14.2□□□□□ -0.14
SYNGAP1-202ENST00000418600 VWA8A3KMH1 1905 aa14.2□□□□□ -0.14
SYNGAP1-202ENST00000418600 IGHV3-49A0A0A0MS15 119 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 KLF4O43474 513 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 PRSS23O95084 383 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 HSF4Q9ULV5 492 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 SIGLEC5O15389 551 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 CTF1Q16619 201 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 Q96M66 194 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 LINC00869P0C866 280 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 ADIPOQQ15848 244 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 SAMD13Q5VXD3 122 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 C21orf62Q9NYP8 219 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 CTXND1A0A1B0GTU2 59 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 A0A1W2PP11 408 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 PGLYRP1O75594 196 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 C8orf82Q6P1X6 216 aaPredicted RBP14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 C12orf57Q99622 126 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 NPVFQ9HCQ7 196 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 TBL2Q9Y4P3 447 aaKnown RBP14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 ANK1P16157 1881 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 OR1N2Q8NGR9 330 aa14.19□□□□□ -0.14
SYNGAP1-202ENST00000418600 XAF1Q6GPH4 301 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 TEX38Q6PEX7 206 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 TRBV5-5A0A0J9YX44 114 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 TMEM255AQ5JRV8 349 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 LCNL1Q6ZST4 164 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 OR10D4PQ8NGN7 298 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 MARCH11A6NNE9 402 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 IL4P05112 153 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 COX6CP09669 75 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 GTF3AQ92664 365 aaKnown RBP14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 TNFRSF14Q92956 283 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 SH3BGRL3Q9H299 93 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 GREB1Q4ZG55 1949 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 TMEM189A5PLL7 270 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 C12orf77C9JDV5 145 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 EFNB2P52799 333 aa14.18□□□□□ -0.14
SYNGAP1-202ENST00000418600 IGHV2-26A0A0B4J1V2 119 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 APCSP02743 223 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 FAM216AQ8WUB2 273 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 FAM53AQ6NSI3 398 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 SLX1AQ9BQ83 275 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 RBKSQ9H477 322 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 ZFP30Q9Y2G7 519 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 GATA4P43694 442 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 FAM169BQ8N8A8 192 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 ZNF256Q9Y2P7 627 aaPredicted RBP14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 TMEM238LA0A1B0GVL6 79 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 A6NJY4 79 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 RPS20P60866 119 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 LYZL2Q7Z4W2 148 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 CLDND2Q8NHS1 167 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 NYNRINQ9P2P1 1898 aaKnown RBP14.17□□□□□ -0.14
SYNGAP1-202ENST00000418600 PQLC2LA1A4F0 135 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 MPDU1O75352 247 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 B3GALT5-AS1P59052 145 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 RUSC1-AS1Q66K80 236 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 CABIN1Q9Y6J0 2220 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 TRGV2A0A075B6R0 118 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 CLPSP04118 112 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 ZMAT4Q9H898 229 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 FOXG1P55316 489 aaPredicted RBP14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 TMEM167AQ8TBQ9 72 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 OOSP1A8MZH6 123 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 K7EM74 188 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 RAB37Q96AX2 223 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 KCNK7Q9Y2U2 307 aa14.16□□□□□ -0.14
SYNGAP1-202ENST00000418600 TMSB15BA0A087X1C1 80 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 ZNF324O75467 553 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 CA2P00918 260 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 MMP9P14780 707 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 ERVK11-1P61568 191 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 TXNDC17Q9BRA2 123 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 MRPS18AQ9NVS2 196 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 TCL1AP56279 114 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 EWSR1Q01844 656 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 SLIRPQ9GZT3 109 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 GCM2O75603 506 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 TWIST1Q15672 202 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 TPTE2P1Q5T6R2 138 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 FAM159AQ6UWV7 190 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 A0A0G2JK05 382 aa14.15□□□□□ -0.14
SYNGAP1-202ENST00000418600 MSGN1A6NI15 193 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 WT1P19544 449 aaPredicted RBP14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 HERPUD1Q15011 391 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 ZNF841Q6ZN19 808 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 TBX6O95947 436 aaPredicted RBP14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 RNF224P0DH78 156 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 RHOGP84095 191 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 FAM24BQ8N5W8 94 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 GALNT14Q96FL9 552 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 WNT10AQ9GZT5 417 aa14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 RCC2Q9P258 522 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-202ENST00000418600 TMEM218A2RU14 115 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms