RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 UBE2L6O14933 153 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 NDUFB2O95178 105 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 MUC1P15941 1255 aaPredicted RBP3.05□□□□□ -1.92
LSM5-205ENST00000409952 CRABP1P29762 137 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 G6PCP35575 357 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 KRTAP10-3P60369 221 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 LDLRAD2Q5SZI1 272 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 RASL11AQ6T310 242 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 TOMM20LQ6UXN7 152 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 Q6ZQT7 251 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 EIF4E3Q8N5X7 224 aaKnown RBP3.05□□□□□ -1.92
LSM5-205ENST00000409952 KLF14Q8TD94 323 aaPredicted RBP3.05□□□□□ -1.92
LSM5-205ENST00000409952 DNAJC30Q96LL9 226 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 LYSMD1Q96S90 227 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 SERPINI1Q99574 410 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 PBOV1Q9GZY1 135 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 EFCAB1Q9HAE3 211 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 SPANXA1Q9NS26 97 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 S4R3C0 116 aa3.05□□□□□ -1.92
LSM5-205ENST00000409952 IQSEC2Q5JU85 1478 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 KIF24Q5T7B8 1368 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 TONSLQ96HA7 1378 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 A0A1W2PRE2 83 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 DHRS12A0PJE2 317 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 C7orf66A4D0T2 115 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 H3BQ85 93 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 IFNA7P01567 189 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 TFPTP0C1Z6 253 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 GABRA2P47869 451 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 ATP5G3P48201 142 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 SERPINB10P48595 397 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 RWDD2BP57060 319 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 DEFA3P59666 94 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 TPI1P60174 286 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 RPL30P62888 115 aaKnown RBP3.04□□□□□ -1.92
LSM5-205ENST00000409952 RHEBQ15382 184 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 SURF2Q15527 256 aaPredicted RBP3.04□□□□□ -1.92
LSM5-205ENST00000409952 SSX8Q7RTT4 187 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 ZNF695Q8IW36 515 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 RPS4Y2Q8TD47 263 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 C11orf40Q8WZ69 217 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 MALSU1Q96EH3 234 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 C2orf50Q96LR7 162 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 UPK3BQ9BT76 320 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 LRTM1Q9HBL6 345 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 ANKRD12Q6UB98 2062 aa3.04□□□□□ -1.92
LSM5-205ENST00000409952 DENND4BO75064 1496 aaPredicted RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 CPDO75976 1380 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 A8MWP6 167 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 E7EQ34 232 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 KPNA4O00629 521 aaPredicted RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 WISP3O95389 354 aaPredicted RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 IGHV3-53P01767 116 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 CCL3P10147 92 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 SLC25A16P16260 332 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 RPS4Y1P22090 263 aaKnown RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 S100A7P31151 101 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 RPL27AP46776 148 aaKnown RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 TAS2R20P59543 309 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 CCL20P78556 96 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 SCGB2B2Q4G0G5 96 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 SAMD13Q5VXD3 122 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 SPATA12Q7Z6I5 190 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 ZNF709Q8N972 641 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 OR13C4Q8NGS5 318 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 RMND5BQ96G75 393 aaPredicted RBP3.03□□□□□ -1.92
LSM5-205ENST00000409952 MGLLQ99685 303 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 SEC22CQ9BRL7 303 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 ERGIC3Q9Y282 383 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 DOCK8Q8NF50 2099 aa3.03□□□□□ -1.92
LSM5-205ENST00000409952 NAV1Q8NEY1 1877 aa3.03□□□□□ -1.93
LSM5-205ENST00000409952 SETD5Q9C0A6 1442 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 NID2Q14112 1375 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 ABCC12Q96J65 1359 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 YLPM1P49750 1951 aaKnown RBP3.02□□□□□ -1.93
LSM5-205ENST00000409952 ZNF98A6NK75 572 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 C16orf90A8MZG2 172 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 CLDN25C9JDP6 229 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 ARPC5O15511 151 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 IFNA10P01566 189 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 PPBPP02775 128 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 ZNF286BP0CG31 522 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BOP23527 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BBP33778 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 CSN1S1P47710 185 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BDP58876 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BCP62807 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 RBX1P62877 108 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST2H2BEQ16778 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.02□□□□□ -1.93
LSM5-205ENST00000409952 TMEM69Q5SWH9 247 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 RPL22L1Q6P5R6 122 aaKnown RBP3.02□□□□□ -1.93
LSM5-205ENST00000409952 ZNF880Q6PDB4 577 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 EXOC3-AS1Q8N2X6 119 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 HIST1H2BHQ93079 126 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
LSM5-205ENST00000409952 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms