RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SH3BGRL3Q9H299 93 aa14.1□□□□□ -0.15
PCDHA13-202ENST00000409494 FAM90A9PA6NNJ1 464 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 FOSL1P15407 271 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 LY6G6FQ5SQ64 297 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 GBGT1Q8N5D6 347 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 WFIKKN1Q96NZ8 548 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 GBF1Q92538 1859 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 A0A0G2JNJ9 132 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 TM4SF20Q53R12 229 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 DGAT2L7PQ6IED9 249 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 OR5AU1Q8NGC0 362 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 OR4X2Q8NGF9 303 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 Q9UFV3 132 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 CLDN16Q9Y5I7 305 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 APELAP0DMC3 54 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 FHITP49789 147 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 MEF2BQ02080 365 aaPredicted RBP14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 SLC25A28Q96A46 364 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 DOCK8Q8NF50 2099 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 PLXNA4Q9HCM2 1894 aa14.09□□□□□ -0.15
PCDHA13-202ENST00000409494 WNT5AP41221 380 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 AMTP48728 403 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 PRSS33Q8NF86 280 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 LEAP2Q969E1 77 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 HIST1H2BAQ96A08 127 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 GPHA2Q96T91 129 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 CLEC5AQ9NY25 188 aa14.08□□□□□ -0.15
PCDHA13-202ENST00000409494 CDKN1AP38936 164 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 LY6EQ16553 131 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 RTBDNQ9BSG5 229 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 SLC31A2O15432 143 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 TRGC2P03986 189 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 OTX1P32242 354 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 FAM3BP58499 235 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 ZNF672Q499Z4 452 aaPredicted RBP14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 ATRAIDQ6UW56 229 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM190Q8WZ59 177 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 PKIAP61925 76 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 RNF5Q99942 180 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 RARRES2Q99969 163 aa14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 ZMAT5Q9UDW3 170 aaKnown RBP14.08□□□□□ -0.16
PCDHA13-202ENST00000409494 COL25A1Q9BXS0 654 aaPredicted RBP14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 RNASEKQ6P5S7 137 aaKnown RBP14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 TEX45Q8NA69 505 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 TP53RKQ96S44 253 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 CXorf65A6NEN9 183 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 IFI27L2Q9H2X8 130 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 LOC102723971A0A1B0GUV8 181 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 RPL39P5Q59GN2 51 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 RAX2Q96IS3 184 aa14.07□□□□□ -0.16
PCDHA13-202ENST00000409494 VAMP3Q15836 100 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 PPP1R27Q86WC6 154 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 M0R143 59 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 ZNF253O75346 499 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 GPX4P36969 197 aaPredicted RBP14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 PRSS22Q9GZN4 317 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 NBR2O15453 112 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 TRGV3P03979 118 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 SLC25A16P16260 332 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 GNLYP22749 145 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 MORN2Q502X0 79 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 MINOS1Q5TGZ0 78 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 OR4A47Q6IF82 309 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 SYT8Q8NBV8 401 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 ARPC1AQ92747 370 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 MINOS1-NBL1R4GNA1 71 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 DLX6P56179 175 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 SNRPD3P62318 126 aaKnown RBP14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 FAM201AQ5SY85 155 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 FGFBP3Q8TAT2 258 aa14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 AURKAIP1Q9NWT8 199 aaPredicted RBP14.06□□□□□ -0.16
PCDHA13-202ENST00000409494 IGHV3-21A0A0B4J1V1 117 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 FBLL1A6NHQ2 334 aaKnown RBP14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 MT-ND6P03923 174 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 FCGR2BP31994 310 aaPredicted RBP14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 OR51M1Q9H341 326 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 NDUFS8O00217 210 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 MDKP21741 143 aaPredicted RBP14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 ZNF319Q9P2F9 582 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 WFDC3Q8IUB2 231 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 ZNF738Q8NE65 137 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 DDB2Q92466 427 aa14.05□□□□□ -0.16
PCDHA13-202ENST00000409494 EIF3GO75821 320 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 IGKV3-15P01624 115 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 TCL1AP56279 114 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 MIC13Q5XKP0 118 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 HEPN1Q6WQI6 88 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 YAE1D1Q9NRH1 226 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 METRNQ9UJH8 293 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 RPUSD1Q9UJJ7 312 aaKnown RBP14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 IGKV3-7A0A075B6H7 116 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 TRAV24A0A0B4J272 114 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 SGMS2Q8NHU3 365 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
PCDHA13-202ENST00000409494 MYLKQ15746 1914 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms