RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MED11Q9P086 117 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC23A2Q9UGH3 650 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 HS3ST2Q9Y278 367 aa2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 LSM5Q9Y4Y9 91 aaKnown RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 COL27A1Q8IZC6 1860 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P13-201ENST00000406019 ADGRL2O95490 1459 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 MYH3P11055 1940 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 IGHV1-3A0A0C4DH29 117 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 A0A1B0GX51 115 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FABP5P3A8MUU1 101 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 K7EQS6 105 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 PRB2P02812 416 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 DEFA3P59666 94 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 C1QTNF8P60827 252 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 RPL26P61254 145 aaKnown RBP2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 HIST1H3AP68431 136 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 H3F3AP84243 136 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 GLYATL3Q5SZD4 288 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM222AQ5U5X8 452 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 HRCT1Q6UXD1 115 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 HIST2H3AQ71DI3 136 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 CROCCP2Q86T23 111 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF101Q8IZC7 436 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 C1orf158Q8N1D5 194 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 LINC00471Q8N535 108 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM24BQ8N5W8 94 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 PACRGLQ8N7B6 248 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF555Q8NEP9 628 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR51A2Q8NGJ7 313 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR2K2Q8NGT1 345 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM57AQ8TBR7 257 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF418Q8TF45 676 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR5P3Q8WZ94 311 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC7A6Q92536 515 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 RNF157Q96PX1 679 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 RTBDNQ9BSG5 229 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM222Q9H0R3 208 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 POMKQ9H5K3 350 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 CISHQ9NSE2 258 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 CBLN4Q9NTU7 201 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 TAS2R5Q9NYW4 299 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 TRAPPC2LQ9UL33 140 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 RPL26L1Q9UNX3 145 aaKnown RBP2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FMN1Q68DA7 1419 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 KIAA1551Q9HCM1 1747 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 ABCC12Q96J65 1359 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZFYVE16Q7Z3T8 1539 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 FOCADQ5VW36 1801 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 PHIPQ8WWQ0 1821 aa2.98□□□□□ -1.93
HMGB1P13-201ENST00000406019 AKAP11Q9UKA4 1901 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 CCDC88BA6NC98 1476 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 YTHDC2Q9H6S0 1430 aaKnown RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 LOC107984640A0A0U1RRK4 108 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 MYBPHLA2RUH7 354 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 A8MWL6 223 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR2A4O95047 310 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 KCNK2O95069 426 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 NRASP01111 189 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 PMP2P02689 132 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 MAS1P04201 325 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 APODP05090 189 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 CECR9P0C854 216 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 ORM2P19652 201 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 CDK2P24941 298 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 MIPP30301 263 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 POLR2HP52434 150 aaKnown RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 EMP1P54849 157 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 S100A10P60903 97 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 RPS25P62851 125 aaKnown RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 SELENOWP63302 87 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 HBG1P69891 147 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 HBG2P69892 147 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 TNFAIP6P98066 277 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM69Q5SWH9 247 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 GLYATQ6IB77 296 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 WDR59Q6PJI9 974 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF695Q8IW36 515 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF664Q8N3J9 261 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC35G3Q8N808 338 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR4S1Q8NGB4 309 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 JOSD2Q8TAC2 188 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF420Q8TAQ5 688 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 FRZBQ92765 325 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 KLK6Q92876 244 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR2A7Q96R45 310 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 MRPL57Q9BQC6 102 aaKnown RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 HSPB9Q9BQS6 159 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 LXNQ9BS40 222 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR2J1Q9GZK6 312 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 EFCAB1Q9HAE3 211 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 SPANXA1Q9NS26 97 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 UQCC1Q9NVA1 299 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 MRPL27Q9P0M9 148 aaKnown RBP2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 COMMD3Q9UBI1 195 aa2.97□□□□□ -1.93
HMGB1P13-201ENST00000406019 NAT8BQ9UHF3 227 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms