RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 RPA2P15927 270 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 RPL30P62888 115 aaKnown RBP6.12□□□□□ -1.43
SCFD1-202ENST00000396629 ST3GAL4Q11206 333 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 P2RY14Q15391 338 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 RBMY1FQ15415 496 aaKnown RBP6.12□□□□□ -1.43
SCFD1-202ENST00000396629 SSX1Q16384 188 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 Q6ZTC4 211 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 KCTD9Q7L273 389 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF645Q8N7E2 425 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 OR56B1Q8NGI3 324 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 VN1R17PQ8TDU5 208 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 GINS4Q9BRT9 223 aa6.12□□□□□ -1.43
SCFD1-202ENST00000396629 MRPS7Q9Y2R9 242 aaKnown RBP6.12□□□□□ -1.43
SCFD1-202ENST00000396629 SLC17A2O00624 439 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 CDK2AP2O75956 126 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 CA1P00915 261 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 AMBPP02760 352 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 RASSF2P50749 326 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 WNT4P56705 351 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 MS4A15Q8N5U1 240 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 GFI1Q99684 422 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 SMPXQ9UHP9 88 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 IGHV4-28A0A0C4DH34 117 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 C15orf61A6NNL5 157 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 MRPS14O60783 128 aaKnown RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 CIB2O75838 187 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 UCHL1P09936 223 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 BRWD1-AS2P59051 145 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 RPL8P62917 257 aaKnown RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 MRPS15P82914 257 aaKnown RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 EIF4EBP1Q13541 118 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 HSD17B12Q53GQ0 312 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 OR2B11Q5JQS5 317 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 ZFP1Q6P2D0 407 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 Q6ZR54 194 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 Q6ZS49 121 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF555Q8NEP9 628 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 OR4S2Q8NH73 311 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 MAFIPQ8WZ33 124 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 BSCL2Q96G97 398 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-202ENST00000396629 ATP6V0BQ99437 205 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 CENPOQ9BU64 300 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 THYN1Q9P016 225 aa6.11□□□□□ -1.43
SCFD1-202ENST00000396629 IGLC7A0M8Q6 106 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 OR2T8A6NH00 312 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 C15orf62A8K5M9 175 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 SLC22A5O76082 557 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 IGLV2-14P01704 120 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 HLA-DQB1P01920 261 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 HLA-GP17693 338 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 CRHBPP24387 322 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 OR2B8PP59922 312 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 FAM90A2PQ658T7 463 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 SPSB3Q6PJ21 355 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 NANOGP1Q8N7R0 232 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 MAPKAPK5-AS1Q8N8E1 139 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF414Q96IQ9 312 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 RNF2Q99496 336 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
SCFD1-202ENST00000396629 BET1LQ9NYM9 111 aa6.1□□□□□ -1.43
SCFD1-202ENST00000396629 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 CHEK1O14757 476 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 MYL12BO14950 172 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF207O43670 478 aaKnown RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 ATP5HO75947 161 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 HRASP01112 189 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 MIFP14174 115 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 CD36P16671 472 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 C2orf76Q3KRA6 126 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 HSD17B10Q99714 261 aaKnown RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 CHRDL1Q9BU40 450 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 C20orf24Q9BUV8 137 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 PLGRKTQ9HBL7 147 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 HERC1Q15751 4861 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 IGKV1D-8A0A087WSZ0 117 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 IGHV7-4-1A0A0J9YVY3 117 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 F8W735 103 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 RAB27BO00194 218 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 MFNGO00587 321 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 DENRO43583 198 aaKnown RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 GIG44P09565 113 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-202ENST00000396629 TFPI2P48307 235 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 PLA2G7Q13093 441 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 RAB11BQ15907 218 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 MFSD4AQ8N468 514 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 FAM3DQ96BQ1 224 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 RAB3CQ96E17 227 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 RHPN1-AS1Q9BWJ2 59 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 RAB22AQ9UL26 194 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 OR2W1Q9Y3N9 320 aa6.09□□□□□ -1.43
SCFD1-202ENST00000396629 IGHV3OR16-8A0A075B7F1 116 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 DEFB131BA0A096LNP1 70 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 TMEM272A0A1B0GTI8 110 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 J3QRK9 145 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 CD74P04233 296 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 CLDN12P56749 244 aa6.08□□□□□ -1.44
SCFD1-202ENST00000396629 C12orf74Q32Q52 190 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms