RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IGLV3-27P01718 113 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 HSPB1P04792 205 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 PPIBP23284 216 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 PPP1CCP36873 323 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 RBMXP38159 391 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 POLR2HP52434 150 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 CAV1Q03135 178 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 KIAA0040Q15053 153 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 C3orf62Q6ZUJ4 267 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF283Q8N7M2 679 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 ZDHHC22Q8N966 263 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 OR4K5Q8NGD3 323 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 OR13C4Q8NGS5 318 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF721Q8TF20 911 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 C15orf40Q8WUR7 153 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 MS4A6EQ96DS6 147 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 ADAT3Q96EY9 351 aaPredicted RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 PHYHIPLQ96FC7 376 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 PDXPQ96GD0 296 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 C11orf68Q9H3H3 251 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 POPDC3Q9HBV1 291 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 SDF2L1Q9HCN8 221 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 SCRT2Q9NQ03 307 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 GPR84Q9NQS5 396 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 TAAR3PQ9P1P4 343 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 NUFIP1Q9UHK0 495 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 RPUSD1Q9UJJ7 312 aaKnown RBP3.53□□□□□ -1.85
GABPB1-204ENST00000396464 U3KQ87 197 aa3.53□□□□□ -1.85
GABPB1-204ENST00000396464 CACNA1SQ13698 1873 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 LTN1O94822 1766 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 NRKQ7Z2Y5 1582 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 RAI1Q7Z5J4 1906 aaPredicted RBP3.52□□□□□ -1.85
GABPB1-204ENST00000396464 CHD5Q8TDI0 1954 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 SCN10AQ9Y5Y9 1956 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 NHSL1Q5SYE7 1610 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 DOCK5Q9H7D0 1870 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 TRBV19A0A075B6N1 114 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 A0A096LPI6 279 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 TPST1O60507 370 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF354AO60765 605 aaPredicted RBP3.52□□□□□ -1.85
GABPB1-204ENST00000396464 IGKV1-39P01597 117 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 IGLV2-11P01706 119 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 IGHV3-11P01762 117 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 IGKV1D-39P04432 117 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 INAFM2P0DMQ5 153 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 RPS4Y1P22090 263 aaKnown RBP3.52□□□□□ -1.85
GABPB1-204ENST00000396464 EVX1P49640 407 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 RAB13P51153 203 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 LOXL1Q08397 574 aaPredicted RBP3.52□□□□□ -1.85
GABPB1-204ENST00000396464 ENDOGQ14249 297 aaKnown RBP3.52□□□□□ -1.85
GABPB1-204ENST00000396464 GRK1Q15835 563 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 SCGB2B2Q4G0G5 96 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 Q6Q795 121 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 BAP18Q8IXM2 172 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 SGMS2Q8NHU3 365 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 TMEM203Q969S6 136 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 DERL3Q96Q80 235 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 OR2M2Q96R28 347 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 OR2A5Q96R48 311 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 FBXL12Q9NXK8 326 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 CALML5Q9NZT1 146 aa3.52□□□□□ -1.85
GABPB1-204ENST00000396464 EDC4Q6P2E9 1401 aaKnown RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 SMG6Q86US8 1419 aaKnown RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 IGSF9BQ9UPX0 1349 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 C1orf167Q5SNV9 1468 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 LTBP4Q8N2S1 1624 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 PHRF1Q9P1Y6 1649 aaKnown RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 RTL9Q8NET4 1388 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 PIK3C2AO00443 1686 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 MEIKINA0A087WXM9 373 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 A0A087WYN8 130 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 IGHV3-66A0A0C4DH42 116 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 IGKV1-6A0A0C4DH72 117 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 DUXBA0A1W2PPF3 345 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 COX7A2LO14548 114 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 BANF1O75531 89 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 IGF2P01344 180 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 ADRA2AP08913 450 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 SMIM10L2AP0DMW4 78 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 SMIM10L2BP0DMW5 78 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF25P17030 456 aaPredicted RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 GABRA2P47869 451 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 NMUP48645 174 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF136P52737 540 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 PDGFRLQ15198 375 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 MMDQ15546 238 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 WDR59Q6PJI9 974 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF440Q8IYI8 595 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 SLC22A24Q8N4F4 322 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 ZNF433Q8N7K0 673 aaPredicted RBP3.51□□□□□ -1.85
GABPB1-204ENST00000396464 TMEM229BQ8NBD8 167 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 NUP35Q8NFH5 326 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 SLC7A6Q92536 515 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 CARD19Q96LW7 228 aa3.51□□□□□ -1.85
GABPB1-204ENST00000396464 HMG20AQ9NP66 347 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms