RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SBF1O95248 1867 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
LRRK1-201ENST00000388948 CXCL3P19876 107 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 SULT1A2P50226 295 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 Q96M66 194 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 MPDZO75970 2070 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 H1FOOQ8IZA3 346 aaPredicted RBP12.59□□□□□ -0.39
LRRK1-201ENST00000388948 MAP1LC3AQ9H492 121 aa12.59□□□□□ -0.39
LRRK1-201ENST00000388948 CD24P25063 80 aa12.58□□□□□ -0.39
LRRK1-201ENST00000388948 TMEM252Q8N6L7 170 aa12.58□□□□□ -0.39
LRRK1-201ENST00000388948 MRPS18AQ9NVS2 196 aaKnown RBP12.58□□□□□ -0.39
LRRK1-201ENST00000388948 LINC00305Q7Z4B0 112 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 SEMA5BQ9P283 1151 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 IGF2P01344 180 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 REPIN1Q9BWE0 567 aaKnown RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 ADAMTS7Q9UKP4 1686 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 PCNX1Q96RV3 2341 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 C3orf36Q3SXR2 165 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 MIXL1Q9H2W2 232 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 ZMAT5Q9UDW3 170 aaKnown RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 KBTBD11-OT1A0A1B0GTJ5 212 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 HINT1P49773 126 aaPredicted RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 SELENOHQ8IZQ5 122 aaKnown RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 OR13A1Q8NGR1 328 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 SPRR3Q9UBC9 169 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 TRBV5-5A0A0J9YX44 114 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 MEF2CQ06413 473 aaPredicted RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 ISOC2Q96AB3 205 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 WFDC6Q9BQY6 131 aa12.58□□□□□ -0.4
LRRK1-201ENST00000388948 MRPS18CQ9Y3D5 142 aaKnown RBP12.58□□□□□ -0.4
LRRK1-201ENST00000388948 C20orf204Q6ZNR8 217 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 H3BQ15 152 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 M0R143 59 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 EGR4Q05215 589 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 OR13C6PQ8NH95 151 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 OSR1Q8TAX0 266 aaPredicted RBP12.57□□□□□ -0.4
LRRK1-201ENST00000388948 TAF15Q92804 592 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRRK1-201ENST00000388948 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 LINC00312Q9Y6C7 94 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 GREB1Q4ZG55 1949 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 LOC390937A0A1W2PQ73 354 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 MSGN1A6NI15 193 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 CCL3L1P16619 93 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 BET1LQ9NYM9 111 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 FAM90A26D6RGX4 464 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 H7C1H1 209 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 M0R381 172 aa12.57□□□□□ -0.4
LRRK1-201ENST00000388948 NPIPB13A6NJU9 1138 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 NPIPB4C9JG80 1138 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 DMRTA2Q96SC8 542 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 V9GYH0 126 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 HSPB1P04792 205 aaKnown RBP12.56□□□□□ -0.4
LRRK1-201ENST00000388948 CD33P20138 364 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 ZNF818PQ6ZRF7 136 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 CD74P04233 296 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 ICAM4Q14773 271 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 RGP1Q92546 391 aaPredicted RBP12.56□□□□□ -0.4
LRRK1-201ENST00000388948 MED12Q93074 2177 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 LGALS3P17931 250 aaKnown RBP12.56□□□□□ -0.4
LRRK1-201ENST00000388948 VGLL1Q99990 258 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 SAP30O75446 220 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 C12orf57Q99622 126 aa12.56□□□□□ -0.4
LRRK1-201ENST00000388948 SRD5A1P18405 259 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
LRRK1-201ENST00000388948 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
LRRK1-201ENST00000388948 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 COX6CP09669 75 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 BCL2P10415 239 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 SAMD13Q5VXD3 122 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 RNASE4P34096 147 aaKnown RBP12.55□□□□□ -0.4
LRRK1-201ENST00000388948 IFITM10A6NMD0 228 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 NBR2O15453 112 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 C12orf54Q6X4T0 127 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 NABP2Q9BQ15 211 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
LRRK1-201ENST00000388948 COPS9Q8WXC6 57 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 DOCK9Q9BZ29 2069 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 C12orf77C9JDV5 145 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 AP4M1O00189 453 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 WNT2P09544 360 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 RPRMQ9NS64 109 aa12.55□□□□□ -0.4
LRRK1-201ENST00000388948 IQCF6A8MYZ5 107 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 NTN3O00634 580 aaPredicted RBP12.54□□□□□ -0.4
LRRK1-201ENST00000388948 MSRB2Q9Y3D2 182 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 USF3Q68DE3 2245 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 EFNA4P52798 201 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 C1orf100Q5SVJ3 147 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 TMEM167AQ8TBQ9 72 aa12.54□□□□□ -0.4
LRRK1-201ENST00000388948 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms