RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 IFITM10A6NMD0 228 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 SH3BGRL3Q9H299 93 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
GPC6-201ENST00000377047 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
GPC6-201ENST00000377047 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
GPC6-201ENST00000377047 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 NEU1Q99519 415 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 C9JCJ5 164 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 TXNDC17Q9BRA2 123 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 LINC00312Q9Y6C7 94 aa11.5□□□□□ -0.57
GPC6-201ENST00000377047 CCL3L1P16619 93 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 OR4A47Q6IF82 309 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 SCN5AQ14524 2016 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 FAM3BP58499 235 aaPredicted RBP11.49□□□□□ -0.57
GPC6-201ENST00000377047 CFHR1Q03591 330 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 FLVCR1-AS1Q8TAF5 88 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 MAP1LC3AQ9H492 121 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 NPFFO15130 113 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.49□□□□□ -0.57
GPC6-201ENST00000377047 LHFPL5Q8TAF8 219 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 IGHV3OR16-8A0A075B7F1 116 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 MESP1Q9BRJ9 268 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 NPDC1Q9NQX5 325 aaPredicted RBP11.49□□□□□ -0.57
GPC6-201ENST00000377047 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 CIDEAO60543 219 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 UNQ6494/PRO21346Q6UXR6 183 aa11.49□□□□□ -0.57
GPC6-201ENST00000377047 GCGP01275 180 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 GNLYP22749 145 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 NPFFR1Q9GZQ6 430 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 CDC42EP3Q9UKI2 254 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 IGHV1-18A0A0C4DH31 117 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 A0A0G2JK05 382 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 CEACAM4O75871 244 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 ICAM4Q14773 271 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 SMDT1Q9H4I9 107 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 OTOFQ9HC10 1997 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 RP1P56715 2156 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 RRHO14718 337 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 IFITM3Q01628 133 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
GPC6-201ENST00000377047 TM2D1Q9BX74 207 aa11.48□□□□□ -0.57
GPC6-201ENST00000377047 ZNF250P15622 560 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 CHD5Q8TDI0 1954 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 TRGC1P0CF51 173 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 EMP1P54849 157 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 AQP10Q96PS8 301 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 IFI27L2Q9H2X8 130 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 HTN3P15516 51 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 RARRES2Q99969 163 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 FOXF2Q12947 444 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 TFF1P04155 84 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 IL6RP08887 468 aaPredicted RBP11.47□□□□□ -0.57
GPC6-201ENST00000377047 SMIM12Q96EX1 92 aa11.47□□□□□ -0.57
GPC6-201ENST00000377047 DIRC3C9JPN6 131 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 H7C2G1 150 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 PQLC2LA1A4F0 135 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 CD24P25063 80 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 SMUG1Q53HV7 270 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 LCTP09848 1927 aa11.46□□□□□ -0.57
GPC6-201ENST00000377047 TRAV20A0A0B4J274 112 aa11.46□□□□□ -0.58
GPC6-201ENST00000377047 TRAF4Q9BUZ4 470 aaPredicted RBP11.46□□□□□ -0.58
GPC6-201ENST00000377047 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.58
GPC6-201ENST00000377047 MSGN1A6NI15 193 aa11.46□□□□□ -0.58
GPC6-201ENST00000377047 GCHFRP30047 84 aa11.46□□□□□ -0.58
GPC6-201ENST00000377047 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.58
GPC6-201ENST00000377047 ADIPOQQ15848 244 aa11.46□□□□□ -0.58
GPC6-201ENST00000377047 A6NDN8 102 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 TBX6O95947 436 aaPredicted RBP11.45□□□□□ -0.58
GPC6-201ENST00000377047 NSUN5P1Q3KNT7 163 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 WNT10AQ9GZT5 417 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 TEX45Q8NA69 505 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 DMRTA2Q96SC8 542 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 SPTBP11277 2137 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 MT-ND6P03923 174 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 WBP1Q96G27 269 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
GPC6-201ENST00000377047 NBR2O15453 112 aa11.44□□□□□ -0.58
GPC6-201ENST00000377047 RNASE1P07998 156 aaKnown RBP11.44□□□□□ -0.58
GPC6-201ENST00000377047 IGFBP2P18065 325 aa11.44□□□□□ -0.58
GPC6-201ENST00000377047 GATAD1Q8WUU5 269 aa11.44□□□□□ -0.58
GPC6-201ENST00000377047 ASXL3Q9C0F0 2248 aa11.44□□□□□ -0.58
GPC6-201ENST00000377047 WDR82Q6UXN9 313 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms