RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TNFSF12O43508 249 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 SCGNO76038 276 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 SCAF4O95104 1147 aaKnown RBP13.03□□□□□ -0.32
HLA-A-201ENST00000376802 DHFRP00374 187 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 C8orf88P0DMB2 117 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 HIST1H1BP16401 226 aaKnown RBP13.03□□□□□ -0.32
HLA-A-201ENST00000376802 HSPA13P48723 471 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 OR2B8PP59922 312 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 MSMO1Q15800 293 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 GVQW1Q8N7I0 195 aa13.03□□□□□ -0.32
HLA-A-201ENST00000376802 TRBV7-1A0A0A6YYK4 115 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 TRAV3A0A0B4J244 114 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 IGLC7A0M8Q6 106 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 FCGR2CP31995 323 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 GABARAPL2P60520 117 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 BTNL8Q6UX41 500 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 SPARTQ8N0X7 666 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 BEST4Q8NFU0 473 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 OR4A5Q8NH83 315 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 GGTLC1Q9BX51 225 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.33
HLA-A-201ENST00000376802 MRPS14O60783 128 aaKnown RBP13.01□□□□□ -0.33
HLA-A-201ENST00000376802 DEFA4P12838 97 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 HOGA1Q86XE5 327 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 SPAG16Q8N0X2 631 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 OR13F1Q8NGS4 319 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 ZNF502Q8TBZ5 544 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 SLC25A38Q96DW6 304 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 CXorf58Q96LI9 332 aa13.01□□□□□ -0.33
HLA-A-201ENST00000376802 SULT1C2O00338 296 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 RBFOX2O43251 390 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-A-201ENST00000376802 PPYP01298 95 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 GPR183P32249 361 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 SDC2P34741 201 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 POU2AF1Q16633 256 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 ZNF585BQ52M93 769 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 HRASLSQ9HDD0 168 aa13□□□□□ -0.33
HLA-A-201ENST00000376802 TRAV18A0A075B6X5 111 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
HLA-A-201ENST00000376802 TRAV25A0A0B4J276 109 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 IGHV3-35A0A0C4DH35 117 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 UPK2O00526 184 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 PSMB9P28065 219 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 ARPC4P59998 168 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 ANKRD55Q3KP44 614 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 ZBTB34Q8NCN2 500 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 AIFM2Q9BRQ8 373 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 RNF167Q9H6Y7 350 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 MRPL27Q9P0M9 148 aaKnown RBP12.99□□□□□ -0.33
HLA-A-201ENST00000376802 RAB26Q9ULW5 256 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
HLA-A-201ENST00000376802 HPRT1P00492 218 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 PTBP1P26599 531 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-A-201ENST00000376802 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
HLA-A-201ENST00000376802 TAS2R31P59538 309 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-A-201ENST00000376802 ZNF818PQ6ZRF7 136 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 OR10W1Q8NGF6 305 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 LINC00476Q8WZB0 136 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 MARC2Q969Z3 335 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
HLA-A-201ENST00000376802 ZNF436Q9C0F3 470 aaPredicted RBP12.98□□□□□ -0.33
HLA-A-201ENST00000376802 SLC5A7Q9GZV3 580 aa12.98□□□□□ -0.33
HLA-A-201ENST00000376802 FCER2P06734 321 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 FGF2P09038 288 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 NQO2P16083 231 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 SCAND1P57086 179 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 MXD1Q05195 221 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 PLET1Q6UQ28 207 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 WFDC3Q8IUB2 231 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 OR1L6Q8NGR2 347 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 COMMD5Q9GZQ3 224 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 AUNIPQ9H7T9 357 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 ETV7Q9Y603 341 aa12.97□□□□□ -0.33
HLA-A-201ENST00000376802 FXYD4P59646 89 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 WT1-ASQ06250 92 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
HLA-A-201ENST00000376802 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 GIMAP1Q8WWP7 306 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 FCGR1BQ92637 280 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.33
HLA-A-201ENST00000376802 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 PLEKHA2Q9HB19 425 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 TMEM140Q9NV12 185 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.33
HLA-A-201ENST00000376802 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 A0A0A6YYH2 397 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 A0A0J9YWU9 116 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 A6NJ64 397 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 TGOLN2O43493 480 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 S1PR2O95136 353 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 GNRHRP30968 328 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 MFAP2P55001 183 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 CATR1Q13166 79 aa12.95□□□□□ -0.34
HLA-A-201ENST00000376802 GDPD1Q8N9F7 314 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms