RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TOMM40O96008 361 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
UBR4-204ENST00000375254 IGLC1P0CG04 106 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 MST1P26927 711 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 ZNF83P51522 516 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 TMUB1Q9BVT8 246 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 PRR13Q9NZ81 148 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 FAM222BQ8WU58 562 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 UBL5Q9BZL1 73 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 ADGRB2O60241 1585 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 VCYO14598 125 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 NAPSAO96009 420 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 RNASE1P07998 156 aaKnown RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 TMPRSS2O15393 492 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 DUX4L9Q6RFH8 374 aaPredicted RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 MSGN1A6NI15 193 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 C9orf50Q5SZB4 431 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 A0A1W2PPV9 198 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 H3BMG7 143 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 CFIP05156 583 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 RPS27P42677 84 aaKnown RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 NOGQ13253 232 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 NPYP01303 97 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 IGLC7A0M8Q6 106 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 DUTP33316 252 aaKnown RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 POLEQ07864 2286 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 FAM166AQ6J272 317 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 CENPVQ7Z7K6 275 aaPredicted RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 ATP6V0E2Q8NHE4 81 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 EP300Q09472 2414 aaPredicted RBP5.62□□□□□ -1.51
UBR4-204ENST00000375254 PCSK4Q6UW60 755 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 FXYD3Q14802 87 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 H0YIZ8 118 aa5.62□□□□□ -1.51
UBR4-204ENST00000375254 STPG4Q8N801 248 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 LYPD6BQ8NI32 183 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 DEFB108AA8MXU0 73 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MPV17P39210 176 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 C12orf76Q8N812 135 aaPredicted RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 NPIPB11E5RHQ5 1161 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 ADAMTS12P58397 1594 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 AKAP6Q13023 2319 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MGST3O14880 152 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 HERV-K104P63124 156 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MRPS18CQ9Y3D5 142 aaKnown RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 VWC2LB2RUY7 222 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 SCTP09683 121 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 CD38P28907 300 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 C1orf61Q13536 156 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 Q6ZWC4 215 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MRPL43Q8N983 215 aaKnown RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 DUX5Q96PT3 197 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 NUP214P35658 2090 aaPredicted RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 UBE2L6O14933 153 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 LYPD1Q8N2G4 141 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 LCN12Q6JVE5 192 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 PLA2G3Q9NZ20 509 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 PTGER1P34995 402 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 CEND1Q8N111 149 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 RNASE8Q8TDE3 154 aaKnown RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 RBMY1FQ15415 496 aaKnown RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 LINC00696Q6ZRV3 163 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 DOCK9Q9BZ29 2069 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 SAA2-SAA4A0A096LPE2 208 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 MGPP08493 103 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 Q6ZVH6 145 aa5.61□□□□□ -1.51
UBR4-204ENST00000375254 KISS1RQ969F8 398 aaPredicted RBP5.61□□□□□ -1.51
UBR4-204ENST00000375254 KNCNA6PVL3 124 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 SDK1Q7Z5N4 2213 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 PIGYQ3MUY2 71 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 C9JAW5 83 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 B4GALT1P15291 398 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 SPRYD7Q5W111 196 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 FAM214BQ7L5A3 538 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 TMEFF1Q8IYR6 380 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 TRAV13-1A0A0B4J241 112 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 CEACAM8P31997 349 aaPredicted RBP5.6□□□□□ -1.51
UBR4-204ENST00000375254 SPINK9Q5DT21 86 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 PRSS41Q7RTY9 318 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 GCSAMQ8N6F7 178 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 COL5A2P05997 1499 aaPredicted RBP5.6□□□□□ -1.51
UBR4-204ENST00000375254 SHISA9B4DS77 424 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 PPIHO43447 177 aaKnown RBP5.6□□□□□ -1.51
UBR4-204ENST00000375254 C8orf46Q8TAG6 207 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 UBE2WQ96B02 151 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 INTS1Q8N201 2190 aaKnown RBP5.6□□□□□ -1.51
UBR4-204ENST00000375254 DNAJC25-GNG10A0A024R161 153 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 LINC00271P0C7V0 271 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 CFPP27918 469 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 EBLN2Q6P2I7 272 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 GLMPQ8WWB7 406 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 LGALS9BQ3B8N2 356 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 LGALS9CQ6DKI2 356 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 C8orf86Q6ZUL3 223 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 SARAFQ96BY9 339 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 K7EMI3 77 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 TMSB15BA0A087X1C1 80 aa5.6□□□□□ -1.51
UBR4-204ENST00000375254 hDV102S1A0JD36 115 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms