RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CD99P14209 185 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 ZNF134P52741 427 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 NDUFA6P56556 154 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 RHOBP62745 196 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 HOXA4Q00056 320 aaPredicted RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 FAM27E3Q08E93 113 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 FAM71F2Q6NXP2 309 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 ZNF343Q6P1L6 599 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 SLC25A48Q6ZT89 311 aaKnown RBP10.07□□□□□ -0.8
UBR4-203ENST00000375225 PLPPR2Q96GM1 343 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 OR51B2Q9Y5P1 312 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 PXMP4Q9Y6I8 212 aa10.07□□□□□ -0.8
UBR4-203ENST00000375225 TANC2Q9HCD6 1990 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 A0A1W2PPE3 182 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 C17orf100A8MU93 164 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 PROP1O75360 226 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 CLN5O75503 358 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 GYPAP02724 150 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 NDUFB7P17568 137 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 GALR1P47211 349 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
UBR4-203ENST00000375225 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 C16orf82Q7Z2V1 217 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 ZNF439Q8NDP4 499 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 OSR1Q8TAX0 266 aaPredicted RBP10.06□□□□□ -0.8
UBR4-203ENST00000375225 CCL13Q99616 98 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 SSX3Q99909 188 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 GAR1Q9NY12 217 aaKnown RBP10.06□□□□□ -0.8
UBR4-203ENST00000375225 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
UBR4-203ENST00000375225 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 RP1L1Q8IWN7 2480 aaPredicted RBP10.05□□□□□ -0.8
UBR4-203ENST00000375225 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 HMGB3O15347 200 aaKnown RBP10.05□□□□□ -0.8
UBR4-203ENST00000375225 SLC31A2O15432 143 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 CHRNB4P30926 498 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
UBR4-203ENST00000375225 FAM3BP58499 235 aaPredicted RBP10.05□□□□□ -0.8
UBR4-203ENST00000375225 B2MP61769 119 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 SSX2Q16385 188 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 WFDC8Q8IUA0 241 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 DEFB108BQ8NET1 73 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 OR4A5Q8NH83 315 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 UHRF2Q96PU4 802 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 IMMP2LQ96T52 175 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 C19orf24Q9BVV8 132 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 MS4A5Q9H3V2 200 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 BET1LQ9NYM9 111 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 DOK5Q9P104 306 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
UBR4-203ENST00000375225 HCFC1P51610 2035 aa10.05□□□□□ -0.8
UBR4-203ENST00000375225 SPTA1P02549 2419 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 CACNA1DQ01668 2161 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 USF3Q68DE3 2245 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 PPIAL4EA0A075B759 164 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 PPIAL4DF5H284 164 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 J3QR06 171 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 UPK2O00526 184 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 RRHO14718 337 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 TMPRSS2O15393 492 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 OR4A8P0C604 315 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 PPIAL4FP0DN26 164 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 LINC00205P59089 165 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 RPS16P62249 146 aaKnown RBP10.04□□□□□ -0.8
UBR4-203ENST00000375225 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 LRRC10Q5BKY1 277 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
UBR4-203ENST00000375225 C8orf31Q8N9H6 132 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 SLC35E1Q96K37 410 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 MGST2Q99735 147 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 SAP30LQ9HAJ7 183 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 PPIAL4AQ9Y536 164 aa10.04□□□□□ -0.8
UBR4-203ENST00000375225 A0A1W2PN81 502 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 PRSS46E5RG02 174 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 NDUFB3O43676 98 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 TRGC2P03986 189 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 IL3RAP26951 378 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 CCKARP32238 428 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 CHRNA7P36544 502 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 GNG10P50151 68 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 RPL31P62899 125 aaKnown RBP10.03□□□□□ -0.8
UBR4-203ENST00000375225 SPRNQ5BIV9 151 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 VKORC1L1Q8N0U8 176 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 ABHD12Q8N2K0 398 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 FAM216BQ8N7L0 139 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 PYGO2Q9BRQ0 406 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
UBR4-203ENST00000375225 DSPP15924 2871 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms