RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 RAB9BQ9NP90 201 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 NAV3Q8IVL0 2385 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 PAGE4O60829 102 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 CA2P00918 260 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 FOLR2P14207 255 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 CDSNQ15517 529 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 MOB3BQ86TA1 216 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 CORO2AQ92828 525 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 MGST2Q99735 147 aa13.06□□□□□ -0.32
CNKSR1-202ENST00000374253 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 DVL1O14640 695 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 IFNA1P01562 189 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 NDUFA2O43678 99 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 HSPE1P61604 102 aaKnown RBP13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 NCMAPQ5T1S8 102 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 C1orf87Q8N0U7 546 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 OR52E5Q8NH55 327 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 YPEL4Q96NS1 127 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 GAL3ST2Q9H3Q3 398 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 TMEM14BQ9NUH8 114 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 MSRB2Q9Y3D2 182 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 COL12A1Q99715 3063 aa13.05□□□□□ -0.32
CNKSR1-202ENST00000374253 NDUFB3O43676 98 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 YIF1AO95070 293 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 MBP02144 154 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 S100A6P06703 90 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 AGAP20933 346 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 PSMB3P49720 205 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 ELOBQ15370 118 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 ADIRFQ15847 76 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 SLC24A4Q8NFF2 622 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 VKORC1Q9BQB6 163 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 ENY2Q9NPA8 101 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 GAB2Q9UQC2 676 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 NPY1RP25929 384 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 RPP30P78346 268 aaKnown RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 PDLIM3Q53GG5 364 aaPredicted RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 WDR25Q64LD2 544 aaPredicted RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 LINC00574Q9H8X3 128 aa13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 RALYQ9UKM9 306 aaKnown RBP13.04□□□□□ -0.32
CNKSR1-202ENST00000374253 J3QR06 171 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 CYB5BO43169 146 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 HRASP01112 189 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 CHRNB4P30926 498 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 MLANAQ16655 118 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 ACOT6Q3I5F7 207 aaPredicted RBP13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 RNF212Q495C1 297 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 OR51G1Q8NGK1 321 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 FOXA2Q9Y261 457 aaPredicted RBP13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 PXMP4Q9Y6I8 212 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 NHLH1Q02575 133 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 RTL8BQ17RB0 113 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 LRRC10Q5BKY1 277 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 OR10X1Q8NGY0 326 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 SDF2L1Q9HCN8 221 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 NGBQ9NPG2 151 aa13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 AURKAIP1Q9NWT8 199 aaPredicted RBP13.03□□□□□ -0.32
CNKSR1-202ENST00000374253 ITPR1Q14643 2758 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 A0A1W2PPV4 95 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 VSTM5A8MXK1 200 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 CCL21O00585 134 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 CD3EP07766 207 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 NECAP1Q8NC96 275 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 HARBI1Q96MB7 349 aa13.02□□□□□ -0.32
CNKSR1-202ENST00000374253 ARHGAP32A7KAX9 2087 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 SIAH2O43255 324 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 LY6HO94772 140 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 SPATA31B1PQ5VZV4 182 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 FAM216AQ8WUB2 273 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 P2RX4Q99571 388 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 PARLQ9H300 379 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 AKAP6Q13023 2319 aa13.02□□□□□ -0.33
CNKSR1-202ENST00000374253 IGHV3-72A0A0B4J1Y9 119 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 ATP5G3P48201 142 aa13.01□□□□□ -0.33
CNKSR1-202ENST00000374253 PLEKHA3Q9HB20 300 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms