RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NPCDR1Q9BY65 106 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 MUC21A0A0G2JKD1 596 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 MUC21A0A140T8X8 626 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 CXorf65A6NEN9 183 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 CEACAM4O75871 244 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 GLRXP35754 106 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 MUC21Q5SSG8 566 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 TMEM160Q9NX00 188 aa18.76■□□□□ 0.59
TM9SF3-201ENST00000371142 TNFSF10P50591 281 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 NHLRC3Q5JS37 347 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 OR13C6PQ8NH95 151 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 SUMO2P61956 95 aaKnown RBP18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 BSPH1Q075Z2 132 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 TMEM136Q6ZRR5 245 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 CLDND2Q8NHS1 167 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 HBBP68871 147 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 COL11A2P13942 1736 aaPredicted RBP18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 CGAP01215 116 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 IGFBP2P18065 325 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 ERASQ7Z444 233 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 CD69Q07108 199 aa18.75■□□□□ 0.59
TM9SF3-201ENST00000371142 COL11A1P12107 1806 aaPredicted RBP18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 RGPD3A6NKT7 1758 aaPredicted RBP18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 IGHV3OR16-8A0A075B7F1 116 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 M0R381 172 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 FOXA3P55318 350 aaPredicted RBP18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 C18orf15Q96N68 181 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 ZNF646O15015 1829 aaPredicted RBP18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 CCDC88CQ9P219 2028 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 GATAD1Q8WUU5 269 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 C17orf98A8MV24 154 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 OR13A1Q8NGR1 328 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 IFI27L2Q9H2X8 130 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 CBLN4Q9NTU7 201 aa18.74■□□□□ 0.59
TM9SF3-201ENST00000371142 FBXL7Q9UJT9 491 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 TRAV24A0A0B4J272 114 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 IFITM2Q01629 132 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 MRPL13Q9BYD1 178 aaKnown RBP18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 TDRD6O60522 2096 aaKnown RBP18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 NPIPB13A6NJU9 1138 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 NPIPB4C9JG80 1138 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 TEX45Q8NA69 505 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 TRBV9A0A0B4J1U6 114 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 JOSD1Q15040 202 aaPredicted RBP18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 WDR82Q6UXN9 313 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 CKAP5Q14008 2032 aa18.73■□□□□ 0.59
TM9SF3-201ENST00000371142 SAPCD1Q5SSQ6 148 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 HIST1H2BAQ96A08 127 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 PARD6GQ9BYG4 376 aaPredicted RBP18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 TGFBR3LH3BV60 316 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 J3QW42 95 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 DDTP30046 118 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 C1QTNF12Q5T7M4 302 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 ITLN2Q8WWU7 325 aaPredicted RBP18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 COPS9Q8WXC6 57 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 PSMG3Q9BT73 122 aaPredicted RBP18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 RPRMQ9NS64 109 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 SHISA3A0PJX4 238 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 TMEM170BQ5T4T1 132 aa18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 RCC1LQ96I51 464 aaKnown RBP18.72■□□□□ 0.59
TM9SF3-201ENST00000371142 SLC17A3O00476 420 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 COL5A3P25940 1745 aaPredicted RBP18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 GPR183P32249 361 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 PRB3Q04118 309 aaPredicted RBP18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 NBEAP1P0C6P0 100 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 MRAP2Q96G30 205 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 DPM3Q9P2X0 92 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 TPRP12270 2363 aaKnown RBP18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 IGHV2OR16-5A0A0B4J2B6 119 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 CELA3BP08861 270 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 CDX1P47902 265 aaPredicted RBP18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 TUBA4BQ9H853 241 aa18.71■□□□□ 0.59
TM9SF3-201ENST00000371142 EMP1P54849 157 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 TRAV8-6A0A0B4J262 113 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 TM2D1Q9BX74 207 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 SCO2A0A1W2PP80 73 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 IGHV1-2P23083 117 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 PPP1R27Q86WC6 154 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 MARVELD3Q96A59 401 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 KCNS1Q96KK3 526 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 MRPL20Q9BYC9 149 aaKnown RBP18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 MSGN1A6NI15 193 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 FAM209BQ5JX69 171 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 CLEC19AQ6UXS0 136 aa18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 OSR1Q8TAX0 266 aaPredicted RBP18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 ZNF837Q96EG3 531 aaPredicted RBP18.7■□□□□ 0.58
TM9SF3-201ENST00000371142 ZNF506Q5JVG8 444 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 CD8AP01732 235 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 ASIPP42127 132 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 ABHD17AQ96GS6 310 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 TNFRSF18Q9Y5U5 241 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 NPIPB9F8W1W9 429 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 NPIPB7O75200 414 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 CA7P43166 264 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 PLSCR2Q9NRY7 297 aa18.69■□□□□ 0.58
TM9SF3-201ENST00000371142 A0A1W2PRX2 142 aa18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 FOXD3Q9UJU5 478 aaPredicted RBP18.68■□□□□ 0.58
TM9SF3-201ENST00000371142 ZP1P60852 638 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms