RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.63
SMG1-201ENST00000330588 EIF4EBP1Q13541 118 aaPredicted RBP4.9□□□□□ -1.63
SMG1-201ENST00000330588 FHL2Q14192 279 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 FXYD3Q14802 87 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 KLK9Q2XQG4 91 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 VMA21Q3ZAQ7 101 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 ACTBL2Q562R1 376 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 GLDNQ6ZMI3 551 aaPredicted RBP4.9□□□□□ -1.63
SMG1-201ENST00000330588 ZNF66Q6ZN08 573 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 C18orf65Q6ZTR6 163 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 ZNF429Q86V71 674 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 VSTM2AQ8TAG5 236 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 SLC25A38Q96DW6 304 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 USMG5Q96IX5 58 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 HARBI1Q96MB7 349 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 B9D2Q9BPU9 175 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 ANXA10Q9UJ72 324 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 KLK9Q9UKQ9 250 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 ANAPC10Q9UM13 185 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 MRPS7Q9Y2R9 242 aaKnown RBP4.9□□□□□ -1.63
SMG1-201ENST00000330588 PRELID3BQ9Y3B1 194 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 FBXO7Q9Y3I1 522 aa4.9□□□□□ -1.63
SMG1-201ENST00000330588 RBM7Q9Y580 266 aaKnown RBP4.9□□□□□ -1.63
SMG1-201ENST00000330588 TMEM235A6NFC5 223 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 HMX3A6NHT5 357 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 B5MCH6 92 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 F8W036 122 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 LINC01619G3V211 115 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 FCN1O00602 326 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 RBFOX2O43251 390 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMG1-201ENST00000330588 XRCC3O43542 346 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 SOX15O60248 233 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 CA2P00918 260 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
SMG1-201ENST00000330588 KRTAP10-11P60412 298 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 SSBP2P81877 361 aaPredicted RBP4.89□□□□□ -1.63
SMG1-201ENST00000330588 CDK10Q15131 360 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 NEDD8Q15843 81 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 UBE2NLQ5JXB2 153 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 UNQ5815/PRO19632Q6UWF5 114 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 HOGA1Q86XE5 327 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 TSPAN14Q8NG11 270 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 OR11H1Q8NG94 326 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 OR1N2Q8NGR9 330 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 OR4S2Q8NH73 311 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 CD300LFQ8TDQ1 290 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 YIPF6Q96EC8 236 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 C5orf30Q96GV9 206 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 KLK15Q9H2R5 256 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 GNB4Q9HAV0 340 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 ZNF230Q9UIE0 474 aaPredicted RBP4.89□□□□□ -1.63
SMG1-201ENST00000330588 RBMX2Q9Y388 322 aaKnown RBP4.89□□□□□ -1.63
SMG1-201ENST00000330588 WSB1Q9Y6I7 421 aa4.89□□□□□ -1.63
SMG1-201ENST00000330588 A0A075B6Q4 140 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 IGKV1D-8A0A087WSZ0 117 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 FAM223BA6NKX1 122 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 SEC14L6B5MCN3 397 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 OVOL1O14753 267 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 AIREO43918 545 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
SMG1-201ENST00000330588 ZP3P21754 424 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 FHITP49789 147 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 NKX2-5P52952 324 aaPredicted RBP4.88□□□□□ -1.63
SMG1-201ENST00000330588 GNB1P62873 340 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 POU2AF1Q16633 256 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 PRSS8Q16651 343 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 CNPY1Q3B7I2 92 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 IDNKQ5T6J7 187 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 ASPHD1Q5U4P2 390 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 ACSM6Q6P461 480 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 KCTD9Q7L273 389 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 SLC25A42Q86VD7 318 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 FAM223AQ8IWN6 122 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 MMD2Q8IY49 270 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 POC5Q8NA72 575 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 BEST4Q8NFU0 473 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 OR6Q1Q8NGQ2 317 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 OR4A5Q8NH83 315 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 DTD1Q8TEA8 209 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 NUDCD2Q8WVJ2 157 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 MARC2Q969Z3 335 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 ST6GALNAC5Q9BVH7 336 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 C1orf43Q9BWL3 253 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 TINAGL1Q9GZM7 467 aaPredicted RBP4.88□□□□□ -1.63
SMG1-201ENST00000330588 AUNIPQ9H7T9 357 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 SEPSECSQ9HD40 501 aaKnown RBP4.88□□□□□ -1.63
SMG1-201ENST00000330588 FAM212BQ9NTI7 297 aaPredicted RBP4.88□□□□□ -1.63
SMG1-201ENST00000330588 SIGLEC8Q9NYZ4 499 aa4.88□□□□□ -1.63
SMG1-201ENST00000330588 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 SRRM4A7MD48 611 aaKnown RBP4.87□□□□□ -1.63
SMG1-201ENST00000330588 LINC00473A8K010 186 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 HRASP01112 189 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 IGLV2-14P01704 120 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 OR9G9P0C7N8 305 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 BCAP31P51572 246 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 RAP2BP61225 183 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 MRGPRG-AS1Q2M3A8 158 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 DEFB136Q30KP8 78 aa4.87□□□□□ -1.63
SMG1-201ENST00000330588 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms