RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 C8orf46Q8TAG6 207 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 PSMG3Q9BT73 122 aaPredicted RBP16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 TMEM133Q9H2Q1 129 aa16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 PATZ1Q9HBE1 687 aaKnown RBP16.51■□□□□ 0.23
RIPPLY3-201ENST00000329553 COL12A1Q99715 3063 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 IFNA17P01571 189 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 CEBPGP53567 150 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 ERVK-16P61578 105 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 SLC35E3Q7Z769 313 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 HAPLN4Q86UW8 402 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR9G1Q8NH87 305 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 SCGB1C1Q8TD33 95 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 TVP23CQ96ET8 276 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 RSG1Q9BU20 258 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 QTRT1Q9BXR0 403 aaKnown RBP16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 RPRMQ9NS64 109 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF727A8MUV8 499 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 AP4M1O00189 453 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 EFNA4P52798 201 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 NIPSNAP3BQ9BS92 247 aa16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 MRPL20Q9BYC9 149 aaKnown RBP16.5■□□□□ 0.23
RIPPLY3-201ENST00000329553 C22orf46C9J442 243 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 METTL15P1P0C7V9 234 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 GPR6P46095 362 aaPredicted RBP16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 DIAPH2-AS1Q14236 149 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 LRRC75BQ2VPJ9 315 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 LY6G5BQ8NDX9 201 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 MBD3L1Q8WWY6 194 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 TCEAL7Q9BRU2 100 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 SLC35D1Q9NTN3 355 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 TMEM140Q9NV12 185 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 FLNCQ14315 2725 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 AKAP6Q13023 2319 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 TRAV3A0A0B4J244 114 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 FAM90A9PA6NNJ1 464 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 REG1BP48304 166 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 GNB2P62879 340 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 PRB3Q04118 309 aaPredicted RBP16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 SPANXN5Q5MJ07 72 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 NANPQ8TBE9 248 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZDHHC16Q969W1 377 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 ST6GALNAC6Q969X2 333 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 RHOVQ96L33 236 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 PARD6GQ9BYG4 376 aaPredicted RBP16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 ARHGAP32A7KAX9 2087 aa16.49■□□□□ 0.23
RIPPLY3-201ENST00000329553 DOPEY1Q5JWR5 2465 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 CXorf65A6NEN9 183 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 OVOL3O00110 214 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 IGKV1-16P04430 117 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 S100A9P06702 114 aaKnown RBP16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 HBG1P69891 147 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 HBG2P69892 147 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF726P1Q15940 193 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 SPINK9Q5DT21 86 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 TMEM186Q96B77 213 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 VSIRQ9H7M9 311 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 SIRT7Q9NRC8 400 aa16.48■□□□□ 0.23
RIPPLY3-201ENST00000329553 SERF2P84101 59 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 RELBQ01201 579 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 ELOBQ15370 118 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 AARDQ4LEZ3 155 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 SLC16A13Q7RTY0 426 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR4A16Q8NH70 328 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 USP9XQ93008 2570 aaPredicted RBP16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 EPG5Q9HCE0 2579 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 DTD1Q8TEA8 209 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 GNG13Q9P2W3 67 aa16.47■□□□□ 0.23
RIPPLY3-201ENST00000329553 LIPFP07098 398 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 BCL2P10415 239 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 RTL8BQ17RB0 113 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 FAM90A2PQ658T7 463 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR4A47Q6IF82 309 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR13D1Q8NGV5 346 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 Q8WTZ3 238 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 SSBP3Q9BWW4 388 aaPredicted RBP16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF462Q96JM2 2506 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 IGHV2-26A0A0B4J1V2 119 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 SRRM4A7MD48 611 aaKnown RBP16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 CEBPZOSA8MTT3 80 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 H0YJW9 148 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 RPS10P46783 165 aaKnown RBP16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF137PP52743 207 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 ZNF787Q6DD87 383 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 OR5AN1Q8NGI8 311 aa16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 WDR61Q9GZS3 305 aaKnown RBP16.46■□□□□ 0.23
RIPPLY3-201ENST00000329553 GOSR1O95249 250 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 HRASP01112 189 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 RBP4P02753 201 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 POU2AF1Q16633 256 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 FAM71F2Q6NXP2 309 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 ZNF343Q6P1L6 599 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 SSX7Q7RTT5 188 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 RCC1LQ96I51 464 aaKnown RBP16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 NABP2Q9BQ15 211 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 ONECUT1Q9UBC0 465 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 B4DEV8 164 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 CXCL1P09341 107 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 TMEM14EPQ6UXP3 125 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 LILRB2Q8N423 598 aa16.45■□□□□ 0.22
RIPPLY3-201ENST00000329553 OR4C12Q96R67 309 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms