RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 PDPNQ86YL7 162 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 OR4C13Q8NGP0 309 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 OR52E5Q8NH55 327 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 NARS2Q96I59 477 aaKnown RBP14.86□□□□□ -0.03
USP39-201ENST00000323701 STRAPQ9Y3F4 350 aaKnown RBP14.86□□□□□ -0.03
USP39-201ENST00000323701 ZANQ9Y493 2812 aa14.86□□□□□ -0.03
USP39-201ENST00000323701 FAM157AC9JC47 383 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 E7EUB6 86 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 DNASE2O00115 360 aaPredicted RBP14.85□□□□□ -0.03
USP39-201ENST00000323701 SEC11BP0C7V7 166 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 COX6B1P14854 86 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 PDLIM4P50479 330 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 ATP5J2P56134 94 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 CLRN3Q8NCR9 226 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 OR11H6Q8NGC7 330 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 PERPQ96FX8 193 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 PCGF1Q9BSM1 259 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 LPAR2Q9HBW0 351 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 OR51B2Q9Y5P1 312 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 IGHV4-61A0A0C4DH41 118 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 RRHO14718 337 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 ENSAO43768 121 aaKnown RBP14.85□□□□□ -0.03
USP39-201ENST00000323701 IL3RAP26951 378 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 HSPE1P61604 102 aaKnown RBP14.85□□□□□ -0.03
USP39-201ENST00000323701 SLC38A11Q08AI6 406 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 PJVKQ0ZLH3 352 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 BET1LQ9NYM9 111 aa14.85□□□□□ -0.03
USP39-201ENST00000323701 FAM74A7A6NL05 159 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 RNASEK-C17orf49H0YIS7 233 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 KBTBD11O94819 623 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 ADCYAP1P18509 176 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 KRTAP10-9P60411 292 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 FLI1Q01543 452 aaPredicted RBP14.84□□□□□ -0.03
USP39-201ENST00000323701 MRGPRG-AS1Q2M3A8 158 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 FAM74A3Q4VXF1 159 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 FBLN7Q53RD9 439 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 MOB3BQ86TA1 216 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 C10orf105Q8TEF2 133 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 FAM168AQ92567 244 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 CIB3Q96Q77 187 aaPredicted RBP14.84□□□□□ -0.03
USP39-201ENST00000323701 HINT2Q9BX68 163 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 SIRPDQ9H106 197 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 HEYLQ9NQ87 328 aaPredicted RBP14.84□□□□□ -0.03
USP39-201ENST00000323701 INSIG2Q9Y5U4 225 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 NAV3Q8IVL0 2385 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 IGHV4-30-2A0A087WSY4 118 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 A0A1W2PPI3 338 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 RAB19A4D1S5 217 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 ODF3BA8MYP8 253 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 HNF4GQ14541 408 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 EIF5AL1Q6IS14 154 aaKnown RBP14.84□□□□□ -0.03
USP39-201ENST00000323701 TMEM182Q6ZP80 229 aaPredicted RBP14.84□□□□□ -0.03
USP39-201ENST00000323701 RPEQ96AT9 228 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 RSG1Q9BU20 258 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 HILPDAQ9Y5L2 63 aa14.84□□□□□ -0.03
USP39-201ENST00000323701 DOPEY2Q9Y3R5 2298 aa14.83□□□□□ -0.03
USP39-201ENST00000323701 IGHV2-70DA0A0C4DH43 119 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 TEX50A0A1B0GTY4 177 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 SLC25A17O43808 307 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 UQCC3Q6UW78 93 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 LILRB2Q8N423 598 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 TMEM218A2RU14 115 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 HOXB4P17483 251 aaPredicted RBP14.83□□□□□ -0.04
USP39-201ENST00000323701 HOXA1P49639 335 aaPredicted RBP14.83□□□□□ -0.04
USP39-201ENST00000323701 HBG1P69891 147 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 HBG2P69892 147 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 C10orf55Q5SWW7 151 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 C1orf122Q6ZSJ8 110 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 THNSL2Q86YJ6 484 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 DYNAPQ8N1N2 210 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 OR10W1Q8NGF6 305 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 OR2G3Q8NGZ4 309 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 CACFD1Q9UGQ2 172 aa14.83□□□□□ -0.04
USP39-201ENST00000323701 UBE2L5PA0A1B0GUS4 154 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 A0A1B0GW64 132 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 PCP4L1A6NKN8 68 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 VWC2LB2RUY7 222 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 IFNA10P01566 189 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 MC5RP33032 325 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 TPTE2P1Q5T6R2 138 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 HRH4Q9H3N8 390 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 PRNDQ9UKY0 176 aa14.82□□□□□ -0.04
USP39-201ENST00000323701 TIMM23O14925 209 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 DFFBO76075 338 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 CD24P25063 80 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 HTR1DP28221 377 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 RAB13P51153 203 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 B2MP61769 119 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 Q6ZRG5 221 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 KIR3DL3Q8N743 410 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 TSNAXQ99598 290 aaKnown RBP14.81□□□□□ -0.04
USP39-201ENST00000323701 NKX6-2Q9C056 277 aaPredicted RBP14.81□□□□□ -0.04
USP39-201ENST00000323701 ZNF430Q9H8G1 570 aaPredicted RBP14.81□□□□□ -0.04
USP39-201ENST00000323701 UNKLQ9H9P5 680 aaKnown RBP14.81□□□□□ -0.04
USP39-201ENST00000323701 KPTNQ9Y664 436 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 CGB1A6NKQ9 187 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 GUCA2BQ16661 112 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 TMEM167AQ8TBQ9 72 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 TBX15Q96SF7 602 aa14.81□□□□□ -0.04
USP39-201ENST00000323701 PIMREGQ9BSJ6 248 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms