RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 C20orf24Q9BUV8 137 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 GGACTQ9BVM4 153 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 C19orf24Q9BVV8 132 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 SDF2L1Q9HCN8 221 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 GLRX2Q9NS18 164 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 TAAR3PQ9P1P4 343 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 VAX2Q9UIW0 290 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 PITPNC1Q9UKF7 332 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 OR2W1Q9Y3N9 320 aa4.04□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV1D-13A0A0B4J2D9 117 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 H0YL77 283 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 SYNGR2O43760 224 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BKO60814 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 MBP02144 154 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BJP06899 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 SERPINE2P07093 398 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 SCTP09683 121 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV1-13P0DP09 117 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 CBR1P16152 277 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 BCL3P20749 454 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BOP23527 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BBP33778 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 NDUFA6P56556 154 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BDP58876 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BCP62807 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 GNG3P63215 75 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 BSPH1Q075Z2 132 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HERPUD1Q15011 391 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HAGHQ16775 308 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST2H2BEQ16778 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 LRRC75BQ2VPJ9 315 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM249Q2WGJ8 235 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 TMEM41BQ5BJD5 291 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 DMRTC1Q5HYR2 192 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 PYY3Q5JQD4 70 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 OR2B11Q5JQS5 317 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 IL17RELQ6ZVW7 336 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 MRPL21Q7Z2W9 205 aaKnown RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 DTX2Q86UW9 622 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST3H2BBQ8N257 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF525Q8N782 197 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 CYB561D1Q8N8Q1 229 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 OR56B2PQ8NGI1 322 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 OR10V1Q8NGI7 309 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 OR5R1Q8NH85 324 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 OR10J5Q8NHC4 309 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 MRPL30Q8TCC3 161 aaKnown RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 RNASEH2CQ8TDP1 164 aaKnown RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 ABHD3Q8WU67 409 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 FAM216AQ8WUB2 273 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 DYRK2Q92630 601 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BHQ93079 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 SLAMF9Q96A28 289 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 GPR146Q96CH1 333 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 GMPPAQ96IJ6 420 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 FAM210BQ96KR6 192 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 PFDN5Q99471 154 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BNQ99877 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 HIST1H2BMQ99879 126 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 ABHD14AQ9BUJ0 271 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 SRD5A3Q9H8P0 318 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 CCL28Q9NRJ3 127 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 LIN7CQ9NUP9 197 aaKnown RBP4.03□□□□□ -1.76
CKS1B-201ENST00000308987 ZNF581Q9P0T4 197 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 NAT8Q9UHE5 227 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
CKS1B-201ENST00000308987 IGKV1-6A0A0C4DH72 117 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 OR5H1A6NKK0 313 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 IFITM10A6NMD0 228 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CD300LBA8K4G0 201 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 E7EQL1 145 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 J3QT63 122 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 DVL1O14640 695 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 PHOX2AO14813 284 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 MRPL33O75394 65 aaKnown RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CST7O76096 145 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 LY6HO94772 140 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 YIF1AO95070 293 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 VENTXO95231 258 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 SYNGR4O95473 234 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CXCL1P09341 107 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 IGHV4-31P0DP07 118 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 OMGP23515 440 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 HAAOP46952 286 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 FOXG1P55316 489 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 PKIAP61925 76 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 ARF1P84077 181 aaKnown RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 DEFA6Q01524 100 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 LOXL1Q08397 574 aaPredicted RBP4.02□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF154Q13106 437 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 P2RY6Q15077 328 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 SLC25A24Q6NUK1 477 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF600Q6ZNG1 722 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 CYP2G1PQ6ZSU1 146 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 TUSC5Q8IXB3 177 aa4.02□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM183AQ8IXX5 376 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms