RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 C1orf100Q5SVJ3 147 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 C20orf173Q96LM9 149 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 FAM234AQ9H0X4 552 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 IDSB3KWA1 339 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 H2BFSP57053 126 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 KLF17Q5JT82 389 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-201ENST00000297405 LOXL4Q96JB6 756 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 RHNO1Q9BSD3 238 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 APOOQ9BUR5 198 aa4.19□□□□□ -1.74
CSMD3-201ENST00000297405 ADAMTS7Q9UKP4 1686 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 NKX2-2O95096 273 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 HOXD3P31249 432 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FER1L6-AS1Q8NA97 138 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 RDH5Q92781 318 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 RNF115Q9Y4L5 304 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 A0A0A6YYD5 115 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV7-9A0A0J9YWB2 115 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 K7EP13 123 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 BCORP1Q8N888 145 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 SARAFQ96BY9 339 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 RCC1LQ96I51 464 aaKnown RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 HIGD1CA8MV81 97 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FFAR1O14842 300 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 IGHV4-34P06331 123 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 ACTL10Q5JWF8 245 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FBXW9Q5XUX1 488 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FBXO17Q96EF6 278 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 LINC00470Q9BZP3 86 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 HCFC2Q9Y5Z7 792 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 R4GN57 208 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 LDLRAD4O15165 306 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 SPEM2Q0P670 501 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 MDP1Q86V88 176 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 PLEKHB2Q96CS7 222 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PP55 124 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 CEACAM18A8MTB9 384 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 PRKNO60260 465 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 VPREB1P12018 145 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 UPK1AO00322 258 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 RPL8P62917 257 aaKnown RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM91Q6ZNR0 172 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 OR8B12Q8NGG6 310 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 MRGPRFQ96AM1 343 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 MISP3Q96FF7 219 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FGF16O43320 207 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 NDUFC1O43677 76 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 DRD3P35462 400 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TSPAN7P41732 249 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 R3HDMLQ9H3Y0 253 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 GZMBP10144 247 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 SP6Q3SY56 376 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM252Q8N6L7 170 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF441Q8N8Z8 693 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 THAP10Q9P2Z0 257 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TRBV6-7A0A0A0MS04 114 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 CFIP05156 583 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 ACRP10323 421 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 KLRK1P26718 216 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 IFI27P40305 119 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 SRSF7Q16629 238 aaKnown RBP eCLIP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 TMEM25Q86YD3 366 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 GFRA4Q9GZZ7 299 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FNDC4Q9H6D8 234 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 COL5A3P25940 1745 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 COL16A1Q07092 1604 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 FNDC10F2Z333 226 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 NGFRP08138 427 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 ARSAP15289 507 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 B4GALNT1Q00973 533 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 PSG3Q16557 428 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 ZNF703Q9H7S9 590 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-201ENST00000297405 SDF2L1Q9HCN8 221 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 V9GYY9 64 aa4.18□□□□□ -1.74
CSMD3-201ENST00000297405 IGLV3-16A0A075B6K0 115 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 DNASE2O00115 360 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GDF9O60383 454 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 PRSS36Q5K4E3 855 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GLCCI1Q86VQ1 547 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FBXL15Q9H469 300 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 RPUSD1Q9UJJ7 312 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PQD3 144 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 A0A1W2PRE2 83 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 H0YL77 283 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GRPP07492 148 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 HSPE1P61604 102 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 ZXDCQ2QGD7 858 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 MEIG1Q5JSS6 88 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 KISS1RQ969F8 398 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 COQ2Q96H96 371 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 NHP2Q9NX24 153 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SNRPD3P62318 126 aaKnown RBP4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SFTPA2Q8IWL1 248 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 SFTPA1Q8IWL2 248 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 FAM57AQ8TBR7 257 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 GKN1Q9NS71 199 aa4.17□□□□□ -1.74
CSMD3-201ENST00000297405 NDUFB3O43676 98 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 521.5 ms