RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 HIST1H2BNQ99877 126 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 HIST1H2BMQ99879 126 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 FOXC2Q99958 501 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 TCF19Q9Y242 345 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 hCG_38984A0A1B0GV85 526 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 IGKV1D-16P01601 117 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 GPX1P07203 203 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 GCHFRP30047 84 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 PIN1P1O15428 100 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 S1PR2O95136 353 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 VENTXO95231 258 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 APOMO95445 188 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 IL11P20809 199 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 CACNG7P62955 275 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 ZCCHC14Q8WYQ9 949 aaKnown RBP9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 HIST1H2BLQ99880 126 aa9.19□□□□□ -0.94
PKNOX1-201ENST00000291547 VWA8A3KMH1 1905 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 RNF222A6NCQ9 220 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A10PA6NDY2 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A18PA6NE21 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A16PA6NEW6 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A20PA6NIJ5 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A8PA6NJQ4 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A7PA6NKC0 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A22PA8MWA6 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A12PA8MX19 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A5PA8MXJ8 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A23PA8MXZ1 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 WNT9BO14905 357 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A15PP0C7V4 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A13PP0C7W8 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A14PP0C7W9 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM90A24PP0C7X0 464 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 ZNF708P17019 499 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 UCP2P55851 309 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 PSG9Q00887 426 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 MEGF9Q9H1U4 602 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 DLL3Q9NYJ7 618 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 SPTBN1Q01082 2364 aaKnown RBP9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 TANC1Q9C0D5 1861 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 TGFAP01135 160 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 CLEC2AQ6UVW9 174 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 POC1AQ8NBT0 407 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 CCDC88CQ9P219 2028 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 ODAMA1E959 279 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 FOXS1O43638 330 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 TRIP6Q15654 476 aaKnown RBP9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 NPIPB3Q92617 1050 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 SFXN3Q9BWM7 321 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 PRDM13Q9H4Q3 707 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
PKNOX1-201ENST00000291547 TRBV5-7A0A0A0MS05 114 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 A0A1W2PQM1 296 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 FGF5P12034 268 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 TNFSF10P50591 281 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 GATAD1Q8WUU5 269 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 EREGO14944 169 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 ZNF658BQ4V348 819 aaPredicted RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 C10orf128Q5T292 105 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 C1orf185Q5T7R7 199 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 FSCN3Q9NQT6 498 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 SLC17A3O00476 420 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 FAM106CPP0CH98 169 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 RNASEH2CQ8TDP1 164 aaKnown RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 APOBEC4Q8WW27 367 aaKnown RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 ITLN1Q8WWA0 313 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 PSMG3Q9BT73 122 aaPredicted RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 CALYQ9NYX4 217 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 MPZP25189 248 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 TMEM187Q14656 261 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 FBLN7Q53RD9 439 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 ZNF324BQ6AW86 544 aaPredicted RBP9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 ZNF721Q8TF20 911 aa9.17□□□□□ -0.94
PKNOX1-201ENST00000291547 ESPL1Q14674 2120 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 MST1P26927 711 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 WDYHV1Q96HA8 205 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 TIMP4Q99727 224 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 MYOFQ9NZM1 2061 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 SCN3AQ9NY46 2000 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 SPTBP11277 2137 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 MIA3Q5JRA6 1907 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 TRAV30A0A087WSZ9 112 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 A0A1B0GTI1 187 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 H3BUT2 72 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 REG1AP05451 166 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 IGLV1-36A0A0B4J1U3 117 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 IGHV3-35A0A0C4DH35 117 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 ZNF818PQ6ZRF7 136 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 RAX2Q96IS3 184 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 MRPL32Q9BYC8 188 aaKnown RBP9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
PKNOX1-201ENST00000291547 ALPK2Q86TB3 2170 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms