RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 OR4A16Q8NH70 328 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 C4orf3Q8WVX3 66 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 SCGB3A2Q96PL1 93 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 TP53RKQ96S44 253 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 SRRQ9GZT4 340 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 ALX4Q9H161 411 aaPredicted RBP5.1□□□□□ -1.59
CD44-204ENST00000279452 SLA2Q9H6Q3 261 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 GNB4Q9HAV0 340 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 BET1LQ9NYM9 111 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 VSIG4Q9Y279 399 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 NUBP2Q9Y5Y2 271 aa5.1□□□□□ -1.59
CD44-204ENST00000279452 COL6A5A8TX70 2615 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ANKRD34BA5PLL1 514 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 CENPXA8MT69 81 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 CCL24O00175 119 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 OR2J3O76001 311 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 DHFRP00374 187 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 OR5AC1P0C628 307 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ANXA3P12429 323 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 AREGP15514 252 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 VAMP1P23763 118 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 SLC6A1P30531 599 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 MYCNOSP40205 109 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 CDX1P47902 265 aaPredicted RBP5.09□□□□□ -1.59
CD44-204ENST00000279452 RND3P61587 244 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ZNF45Q02386 682 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 BAK1Q16611 211 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 MRGPRG-AS1Q2M3A8 158 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ZNF585BQ52M93 769 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 C19orf54Q5BKX5 351 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 SLC25A42Q86VD7 318 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 ZNF491Q8N8L2 437 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 OR11H1Q8NG94 326 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 OR1N2Q8NGR9 330 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 RRNAD1Q96FB5 475 aaKnown RBP5.09□□□□□ -1.59
CD44-204ENST00000279452 RAX2Q96IS3 184 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 UBE2E2Q96LR5 201 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 TMEM68Q96MH6 324 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 TSC22D3Q99576 134 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 PDCD10Q9BUL8 212 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 QTRT1Q9BXR0 403 aaKnown RBP5.09□□□□□ -1.59
CD44-204ENST00000279452 C5orf66Q9H5L9 145 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 NAA60Q9H7X0 242 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 PRNDQ9UKY0 176 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 OR51B2Q9Y5P1 312 aa5.09□□□□□ -1.59
CD44-204ENST00000279452 A0A0G2JLM5 398 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 A6NHS1 94 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 TEX22C9J3V5 150 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 G3V4G9 280 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 H3BUA1 57 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 IFNA17P01571 189 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 LGALS1P09382 135 aaKnown RBP5.08□□□□□ -1.6
CD44-204ENST00000279452 TRAPPC2P0DI81 140 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 TRAPPC2BP0DI82 140 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 IL7P13232 177 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 IGLL1P15814 213 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 CCR6P51684 374 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 RHOGP84095 191 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 ATP5G2Q06055 141 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 ZNF616Q08AN1 781 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 EXOSC2Q13868 293 aaKnown RBP5.08□□□□□ -1.6
CD44-204ENST00000279452 POU2AF1Q16633 256 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 IZUMO4Q1ZYL8 232 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 SPINK9Q5DT21 86 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 TMEM268Q5VZI3 342 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 ETV3LQ6ZN32 361 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 C19orf35Q6ZS72 473 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 MRPL41Q8IXM3 137 aaKnown RBP5.08□□□□□ -1.6
CD44-204ENST00000279452 SLC35G3Q8N808 338 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 RNF152Q8N8N0 203 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 ADAD2Q8NCV1 583 aaKnown RBP5.08□□□□□ -1.6
CD44-204ENST00000279452 OR10W1Q8NGF6 305 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 RTBDNQ9BSG5 229 aaPredicted RBP5.08□□□□□ -1.6
CD44-204ENST00000279452 BATF3Q9NR55 127 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 SLC2A8Q9NY64 477 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 PRR13Q9NZ81 148 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 PTTG2Q9NZH5 202 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 GPR132Q9UNW8 380 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 ZNF257Q9Y2Q1 563 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 KCNIP3Q9Y2W7 256 aa5.08□□□□□ -1.6
CD44-204ENST00000279452 IGHV4OR15-8A0A075B7B6 117 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 A0A087WW49 117 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 TEX50A0A1B0GTY4 177 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 NAP1L6A6NFF2 107 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 CRYM-AS1A6NIL9 109 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 FAM223BA6NKX1 122 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 C15orf61A6NNL5 157 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 NPIPB5A8MRT5 1133 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 E7EUB6 86 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 LINC01619G3V211 115 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 CYB5BO43169 146 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 B3GALNT1O75752 331 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 NXPH3O95157 252 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 IGKV1-39P01597 117 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 IGHV3-23P01764 117 aa5.07□□□□□ -1.6
CD44-204ENST00000279452 IGKV1D-39P04432 117 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms