RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 GGCTO75223 188 aaKnown RBP20.62■□□□□ 0.89
ROM1-201ENST00000278833 TYMSP04818 313 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 STAG3L2P0CL84 134 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 STAG3L3P0CL85 134 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 SELENOVP59797 346 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 GAFA1Q96PS6 74 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 GCM1Q9NP62 436 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 PITPNC1Q9UKF7 332 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 DMRT1Q9Y5R6 373 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 DOCK11Q5JSL3 2073 aa20.62■□□□□ 0.89
ROM1-201ENST00000278833 SAA2-SAA4A0A096LPE2 208 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 IL6RP08887 468 aaPredicted RBP20.61■□□□□ 0.89
ROM1-201ENST00000278833 SAA2P0DJI9 122 aaPredicted RBP20.61■□□□□ 0.89
ROM1-201ENST00000278833 GALR1P47211 349 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 HNF4GQ14541 408 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 COA6Q5JTJ3 125 aaKnown RBP20.61■□□□□ 0.89
ROM1-201ENST00000278833 TEX36Q5VZQ5 186 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 TCF23Q7RTU1 214 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 MS4A5Q9H3V2 200 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 IDI2-AS1Q9NZ38 188 aa20.61■□□□□ 0.89
ROM1-201ENST00000278833 TET2Q6N021 2002 aaPredicted RBP20.61■□□□□ 0.89
ROM1-201ENST00000278833 LINC00587B1AMM8 73 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 K7EM74 188 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 IGHV1-46P01743 117 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 HSPE1P61604 102 aaKnown RBP20.6■□□□□ 0.89
ROM1-201ENST00000278833 KRTCAP3Q53RY4 240 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 ZNF788Q6ZQV5 615 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 C1orf229Q6ZS94 237 aaPredicted RBP20.6■□□□□ 0.89
ROM1-201ENST00000278833 SSX9Q7RTT3 188 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 FAM57AQ8TBR7 257 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 SPENQ96T58 3664 aaKnown RBP20.6■□□□□ 0.89
ROM1-201ENST00000278833 SOD3P08294 240 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 TNFSF4P23510 183 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 NPPCP23582 126 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 TNFAIP6P98066 277 aaPredicted RBP20.6■□□□□ 0.89
ROM1-201ENST00000278833 PYY3Q5JQD4 70 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 IMMP2LQ96T52 175 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 NPVFQ9HCQ7 196 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 PXMP4Q9Y6I8 212 aa20.6■□□□□ 0.89
ROM1-201ENST00000278833 TRAV3A0A0B4J244 114 aa20.59■□□□□ 0.89
ROM1-201ENST00000278833 A0A1W2PPV4 95 aa20.59■□□□□ 0.89
ROM1-201ENST00000278833 ATP5IP56385 69 aaPredicted RBP20.59■□□□□ 0.89
ROM1-201ENST00000278833 FAM3BP58499 235 aaPredicted RBP20.59■□□□□ 0.89
ROM1-201ENST00000278833 OR4X1Q8NH49 305 aa20.59■□□□□ 0.89
ROM1-201ENST00000278833 BTF3L4Q96K17 158 aa20.59■□□□□ 0.89
ROM1-201ENST00000278833 DSCAMO60469 2012 aa20.59■□□□□ 0.89
ROM1-201ENST00000278833 CXorf1O96002 111 aa20.58■□□□□ 0.89
ROM1-201ENST00000278833 OR4A47Q6IF82 309 aa20.58■□□□□ 0.89
ROM1-201ENST00000278833 RPRMLQ8N4K4 120 aa20.58■□□□□ 0.89
ROM1-201ENST00000278833 RBMXL3Q8N7X1 1067 aaKnown RBP20.58■□□□□ 0.89
ROM1-201ENST00000278833 ZNF257Q9Y2Q1 563 aa20.58■□□□□ 0.89
ROM1-201ENST00000278833 A8MXE2 369 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 MRPS11P82912 194 aaKnown RBP20.58■□□□□ 0.88
ROM1-201ENST00000278833 LY6DQ14210 128 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 ZNF383Q8NA42 475 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 SLC24A4Q8NFF2 622 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 C1orf159Q96HA4 380 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 RHOVQ96L33 236 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 TP53TG5Q9Y2B4 290 aa20.58■□□□□ 0.88
ROM1-201ENST00000278833 RAI1Q7Z5J4 1906 aaPredicted RBP20.57■□□□□ 0.88
ROM1-201ENST00000278833 SPTA1P02549 2419 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 TRAV38-1A0A0B4J264 116 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 NPY1RP25929 384 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 CD40P25942 277 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 GNB1P62873 340 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 LCN2P80188 198 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 VKORC1L1Q8N0U8 176 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 PLPPR2Q96GM1 343 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 PRNDQ9UKY0 176 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 CHD6Q8TD26 2715 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 KALRNO60229 2985 aa20.57■□□□□ 0.88
ROM1-201ENST00000278833 SELLP14151 372 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 GCSAMLQ5JQS6 135 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 SLC25A48Q6ZT89 311 aaKnown RBP20.56■□□□□ 0.88
ROM1-201ENST00000278833 LINC01551Q86U37 167 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 ARL2-SNX15V9GYD0 113 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 RPL29P47914 159 aaKnown RBP20.56■□□□□ 0.88
ROM1-201ENST00000278833 VHLLQ6RSH7 139 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 TMEM204Q9BSN7 226 aa20.56■□□□□ 0.88
ROM1-201ENST00000278833 RPUSD1Q9UJJ7 312 aaKnown RBP20.56■□□□□ 0.88
ROM1-201ENST00000278833 PPP5D1E7EU14 171 aa20.55■□□□□ 0.88
ROM1-201ENST00000278833 TMEM183AQ8IXX5 376 aa20.55■□□□□ 0.88
ROM1-201ENST00000278833 ABHD12Q8N2K0 398 aa20.55■□□□□ 0.88
ROM1-201ENST00000278833 GPR61Q9BZJ8 451 aa20.55■□□□□ 0.88
ROM1-201ENST00000278833 ARSJQ5FYB0 599 aaPredicted RBP20.54■□□□□ 0.88
ROM1-201ENST00000278833 UTF1Q5T230 341 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 KCNIP4Q6PIL6 250 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 TEPPQ6URK8 271 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 SSX8Q7RTT4 187 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 CISD2Q8N5K1 135 aaKnown RBP20.54■□□□□ 0.88
ROM1-201ENST00000278833 NEUROG1Q92886 237 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 ACY3Q96HD9 319 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 DEFA4P12838 97 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 ATP5G3P48201 142 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 FAM201AQ5SY85 155 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 MIC13Q5XKP0 118 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 OR10D4PQ8NGN7 298 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 OR2T10Q8NGZ9 312 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 ENY2Q9NPA8 101 aa20.54■□□□□ 0.88
ROM1-201ENST00000278833 LINC00312Q9Y6C7 94 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms