RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 GALP22466 123 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 CNRIP1Q96F85 164 aaPredicted RBP13.61□□□□□ -0.23
UBR3-201ENST00000272793 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 ICAM4Q14773 271 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 TMEM186Q96B77 213 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 FAM214BQ7L5A3 538 aa13.61□□□□□ -0.23
UBR3-201ENST00000272793 NKG7Q16617 165 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 DEFB124Q8NES8 71 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 SEPSECSQ9HD40 501 aaKnown RBP13.6□□□□□ -0.23
UBR3-201ENST00000272793 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 TRACP01848 142 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 CCL8P80075 99 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 PNKDQ8N490 385 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 ASB10Q8WXI3 467 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 SEC11AP67812 179 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 IL20Q9NYY1 176 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 CD28P10747 220 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 TMEM52BQ4KMG9 183 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 C12orf73Q69YU5 71 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 PPIAL4EA0A075B759 164 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 PPIAL4FP0DN26 164 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 PPIAL4AQ9Y536 164 aa13.6□□□□□ -0.23
UBR3-201ENST00000272793 C16orf47Q6ZP98 133 aaPredicted RBP13.59□□□□□ -0.23
UBR3-201ENST00000272793 TMEM126AQ9H061 195 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 ZNHIT1O43257 154 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 TMEM131LA2VDJ0 1609 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 OGG1O15527 345 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 TMPRSS3P57727 454 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 GPR132Q9UNW8 380 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 SELENOKQ9Y6D0 94 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 DPM2O94777 84 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 CAPZBP47756 277 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 WDFY2Q96P53 400 aa13.59□□□□□ -0.23
UBR3-201ENST00000272793 FGF9P31371 208 aaPredicted RBP13.58□□□□□ -0.23
UBR3-201ENST00000272793 DEFB123Q8N688 67 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 FGF14Q92915 247 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 ORMDL3Q8N138 153 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 SNHG12Q9BXW3 62 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
UBR3-201ENST00000272793 SPINK8P0C7L1 97 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 RBM3P98179 157 aaKnown RBP13.58□□□□□ -0.24
UBR3-201ENST00000272793 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.24
UBR3-201ENST00000272793 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 C1QL1O75973 258 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 ACER2Q5QJU3 275 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 CCL13Q99616 98 aa13.58□□□□□ -0.24
UBR3-201ENST00000272793 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
UBR3-201ENST00000272793 A0A1B0GUT8 65 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 TRGV3P03979 118 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 EGR2P11161 476 aaPredicted RBP13.57□□□□□ -0.24
UBR3-201ENST00000272793 ELSPBP1Q96BH3 223 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 MORN3Q6PF18 240 aaPredicted RBP13.57□□□□□ -0.24
UBR3-201ENST00000272793 TXNDC17Q9BRA2 123 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 ST20Q9HBF5 79 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 MALRD1Q5VYJ5 2156 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 MOSP00540 346 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 CEACAM8P31997 349 aaPredicted RBP13.57□□□□□ -0.24
UBR3-201ENST00000272793 OR4X2Q8NGF9 303 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 SH3BGRL3Q9H299 93 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 C8orf88P0DMB2 117 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 H0YL77 283 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 CHCHD5Q9BSY4 110 aa13.57□□□□□ -0.24
UBR3-201ENST00000272793 REPIN1Q9BWE0 567 aaKnown RBP13.57□□□□□ -0.24
UBR3-201ENST00000272793 THAP10Q9P2Z0 257 aaPredicted RBP13.57□□□□□ -0.24
UBR3-201ENST00000272793 DCCP43146 1447 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 TRAV12-1A0A0B4J245 112 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GLIPR1P48060 266 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 ANXA2RQ3ZCQ2 193 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 APOBEC4Q8WW27 367 aaKnown RBP13.56□□□□□ -0.24
UBR3-201ENST00000272793 GLULP15104 373 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 PRRT4C9JH25 899 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 TMEM252Q8N6L7 170 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 OR11H4Q8NGC9 324 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 MGST3O14880 152 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 SCAND1P57086 179 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 SHISA5Q8N114 240 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 A0A0A6YYD5 115 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GAGE12JA6NER3 117 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 MAGEA5P43359 124 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GAGE1Q13065 139 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GAGE4Q13068 117 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GAGE5Q13069 117 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 GAGE6Q13070 117 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 CALYQ9NYX4 217 aa13.56□□□□□ -0.24
UBR3-201ENST00000272793 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
UBR3-201ENST00000272793 TRAV25A0A0B4J276 109 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 C16orf97H3BN30 126 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 TBR1Q16650 682 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 ZNRF1Q8ND25 227 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 S4R3C0 116 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 GP6Q9HCN6 339 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 TOPAZ1Q8N9V7 1692 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 TAF15Q92804 592 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms