RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 ZNF319Q9P2F9 582 aa11.66□□□□□ -0.54
CDH1-201ENST00000261769 PTPRQQ9UMZ3 2332 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 TRBV6-7A0A0A0MS04 114 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 FCN1O00602 326 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 CEACAM8P31997 349 aaPredicted RBP11.65□□□□□ -0.54
CDH1-201ENST00000261769 MIC13Q5XKP0 118 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 ZNF497Q6ZNH5 498 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 ANAPC16Q96DE5 110 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 SEC11CQ9BY50 192 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 PLAUP00749 431 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 UCP1P25874 307 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 SIAH2O43255 324 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH1-201ENST00000261769 PAQR4Q8N4S7 273 aaPredicted RBP11.65□□□□□ -0.54
CDH1-201ENST00000261769 CLDN16Q9Y5I7 305 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 TSC2P49815 1807 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 FRMPD3Q5JV73 1810 aa11.65□□□□□ -0.54
CDH1-201ENST00000261769 SPSB4Q96A44 273 aa11.65□□□□□ -0.55
CDH1-201ENST00000261769 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 PGPA6NDG6 321 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 MYOD1P15172 320 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 ADIPOQQ15848 244 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 MORN2Q502X0 79 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 MINOS1Q5TGZ0 78 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 MINOS1-NBL1R4GNA1 71 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 FREM3P0C091 2139 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 IGKV3-15P01624 115 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 RUNX1Q01196 453 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 A6NNC1 897 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 MRPL32Q9BYC8 188 aaKnown RBP11.64□□□□□ -0.55
CDH1-201ENST00000261769 OR5AC2Q9NZP5 309 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 CACNA1AO00555 2505 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 CA2P00918 260 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 HEPN1Q6WQI6 88 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 TP53RKQ96S44 253 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
CDH1-201ENST00000261769 RSG1Q9BU20 258 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 IFI27L2Q9H2X8 130 aa11.64□□□□□ -0.55
CDH1-201ENST00000261769 PTPRDP23468 1912 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 TRAV24A0A0B4J272 114 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 MSGN1A6NI15 193 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 B4DEV8 164 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 MGPP08493 103 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 ZNF250P15622 560 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 SMDT1Q9H4I9 107 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
CDH1-201ENST00000261769 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 ETV2O00321 342 aaPredicted RBP11.63□□□□□ -0.55
CDH1-201ENST00000261769 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
CDH1-201ENST00000261769 FCER1GP30273 86 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 LINC01356Q8N9X3 169 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 KLHDC3Q9BQ90 382 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDH1-201ENST00000261769 TMEM155Q4W5P6 130 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 DHRS11Q6UWP2 260 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 GGACTQ9BVM4 153 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 HIST3H3Q16695 136 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 CACNG8Q8WXS5 425 aa11.63□□□□□ -0.55
CDH1-201ENST00000261769 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 M0R1W7 72 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 TEX45Q8NA69 505 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 RNASEH2CQ8TDP1 164 aaKnown RBP11.62□□□□□ -0.55
CDH1-201ENST00000261769 OR10C1Q96KK4 312 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 A8MWL6 223 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 GATA3P23771 443 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 RNF212Q495C1 297 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 FAM89BQ8N5H3 189 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 OR51M1Q9H341 326 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 CREBBPQ92793 2442 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 SHISA3A0PJX4 238 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 G0S2P27469 103 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
CDH1-201ENST00000261769 TMEM189A5PLL7 270 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 E7EQL1 145 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 TIMM23O14925 209 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 GPR183P32249 361 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
CDH1-201ENST00000261769 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 ZMAT5Q9UDW3 170 aaKnown RBP11.61□□□□□ -0.55
CDH1-201ENST00000261769 KIAA1671Q9BY89 1806 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 TCL1AP56279 114 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 NHLRC3Q5JS37 347 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 RNASEKQ6P5S7 137 aaKnown RBP11.61□□□□□ -0.55
CDH1-201ENST00000261769 NABP2Q9BQ15 211 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
CDH1-201ENST00000261769 TMEM88Q6PEY1 159 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms