RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MOB3BQ86TA1 216 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 KCNIP3Q9Y2W7 256 aa13.42□□□□□ -0.26
SDCBP-201ENST00000260130 IGKV1D-8A0A087WSZ0 117 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 ITGB1BP1O14713 200 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 FCGR2CP31995 323 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 BTNL8Q6UX41 500 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 ODF3L1Q8IXM7 274 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 C3orf56Q8N813 242 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 NPFFR1Q9GZQ6 430 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 C16orf95Q9H693 158 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 BIN3Q9NQY0 253 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 NECAP2Q9NVZ3 263 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 CLPSL1A2RUU4 121 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 TXNL1O43396 289 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 FBXO24O75426 580 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 CD5P06127 495 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 SFTA3P0C7M3 94 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 OR5H8P0DN80 308 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
SDCBP-201ENST00000260130 IGSF11Q5DX21 431 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 GGNBP1Q5YKI7 109 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 TGIF2LXQ8IUE1 241 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 LINC01006Q8NI28 216 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 CABLES2Q9BTV7 478 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
SDCBP-201ENST00000260130 FBXL17Q9UF56 701 aa13.41□□□□□ -0.26
SDCBP-201ENST00000260130 ST8SIA5O15466 376 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 DIRAS3O95661 229 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
SDCBP-201ENST00000260130 C16orf82Q7Z2V1 217 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 FAM219AQ8IW50 185 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 OR4C13Q8NGP0 309 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 OR10J5Q8NHC4 309 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 IFI27L2Q9H2X8 130 aa13.4□□□□□ -0.26
SDCBP-201ENST00000260130 LSM5Q9Y4Y9 91 aaKnown RBP13.4□□□□□ -0.26
SDCBP-201ENST00000260130 FBLN7Q53RD9 439 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 AKR1E2Q96JD6 320 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 RBM14Q96PK6 669 aaKnown RBP13.39□□□□□ -0.27
SDCBP-201ENST00000260130 AGMATQ9BSE5 352 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 TOLLIPQ9H0E2 274 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 E5RGE8 158 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 RAB29O14966 203 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 PIGPP57054 158 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 HES1Q14469 280 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 ABCA11PQ4W5N1 156 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 DHRS11Q6UWP2 260 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 Q6ZRG5 221 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 SLC25A33Q9BSK2 321 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 FAM212BQ9NTI7 297 aaPredicted RBP13.39□□□□□ -0.27
SDCBP-201ENST00000260130 NSG2Q9Y328 171 aa13.39□□□□□ -0.27
SDCBP-201ENST00000260130 SAA2-SAA4A0A096LPE2 208 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 IGHV3-72A0A0B4J1Y9 119 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 IGKV1D-33P01593 117 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 IGKV1-33P01594 117 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 SAA2P0DJI9 122 aaPredicted RBP13.38□□□□□ -0.27
SDCBP-201ENST00000260130 CD1BP29016 333 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 AKR1D1P51857 326 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 PEA15Q15121 130 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 ZNF833PQ6ZTB9 187 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 COMMD1Q8N668 190 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 GLYATL2Q8WU03 294 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 GALNT14Q96FL9 552 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 NAA60Q9H7X0 242 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 EBI3Q14213 229 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 LYPD6BQ8NI32 183 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 ABHD14BQ96IU4 210 aa13.38□□□□□ -0.27
SDCBP-201ENST00000260130 BORCS7-ASMTA0A0B4J1R7 106 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 SCGB1D2O95969 90 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 TMEM11P17152 192 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 BLCAPP62952 87 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 HNF4GQ14541 408 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 RXFP4Q8TDU9 374 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 S1PR3Q99500 378 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 ZNF747Q9BV97 191 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 PRSS22Q9GZN4 317 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 RNF150Q9ULK6 438 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 CTXN2P0C2S0 81 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 RPL35P42766 123 aaKnown RBP13.37□□□□□ -0.27
SDCBP-201ENST00000260130 TMEM187Q14656 261 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 FAM71F2Q6NXP2 309 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 LRTM2Q8N967 370 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 OR2T6Q8NHC8 308 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
SDCBP-201ENST00000260130 ZNF251Q9BRH9 671 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 ARV1Q9H2C2 271 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 ZNF702PQ9H963 129 aa13.37□□□□□ -0.27
SDCBP-201ENST00000260130 ZNF98A6NK75 572 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 AGPAT2O15120 278 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 TSPAN15O95858 294 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 SEC11BP0C7V7 166 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 RPL39P5Q59GN2 51 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 OR2T10Q8NGZ9 312 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 NABP2Q9BQ15 211 aa13.36□□□□□ -0.27
SDCBP-201ENST00000260130 MRPL20Q9BYC9 149 aaKnown RBP13.36□□□□□ -0.27
SDCBP-201ENST00000260130 SMIM3Q9BZL3 60 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms