RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NPY1RP25929 384 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 KLF3P57682 345 aaPredicted RBP3.49□□□□□ -1.85
UBE4A-201ENST00000252108 UBE2G2P60604 165 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 SELENOTP62341 195 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 C9orf135Q5VTT2 229 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 KIR2DL5AQ8N109 375 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF664Q8N3J9 261 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 DYRK2Q92630 601 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 C12orf49Q9H741 205 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 TANC2Q9HCD6 1990 aa3.49□□□□□ -1.85
UBE4A-201ENST00000252108 TRGV10A0A0A0MS01 117 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 NEURL1O76050 574 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 S1PR2O95136 353 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 LINC00869P0C866 280 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 AREGP15514 252 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 BTF3P20290 206 aaKnown RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 CA7P43166 264 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 TDGF1P3P51864 188 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 OR2J1Q9GZK6 312 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 IL17BQ9UHF5 180 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 HSPB8Q9UJY1 196 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SEC16AO15027 2179 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MARCH11A6NNE9 402 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 CDIPTO14735 213 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MGST1P10620 155 aaKnown RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MDKP21741 143 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF497Q6ZNH5 498 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GTF2H5Q6ZYL4 71 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ORAOV1Q8WV07 137 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MISP3Q96FF7 219 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ATG101Q9BSB4 218 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 PIMREGQ9BSJ6 248 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ABHD14AQ9BUJ0 271 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GSX1Q9H4S2 264 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 CBLN4Q9NTU7 201 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MRPL27Q9P0M9 148 aaKnown RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ZFP30Q9Y2G7 519 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 FAM181BA6NEQ2 426 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SIAH2O43255 324 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 RFPL3SP0C7P2 107 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GCHFRP30047 84 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 CLDN18P56856 261 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GNB1P62873 340 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ZNF146Q15072 292 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 VAMP3Q15836 100 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SPATA45Q537H7 98 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SAPCD1Q5SSQ6 148 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SSX8Q7RTT4 187 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 RBMXL3Q8N7X1 1067 aaKnown RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 KCNS1Q96KK3 526 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV1-6A0A0C4DH72 117 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 OR7C2O60412 319 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 OR2H2O95918 312 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 USF1P22415 310 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 LHX2P50458 406 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ATP5J2P56134 94 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 RPS20P60866 119 aaKnown RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 AARDQ4LEZ3 155 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 MMD2Q8IY49 270 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 C11orf42Q8N5U0 333 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 VN1R17PQ8TDU5 208 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV1D-13A0A0B4J2D9 117 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 C21orf140B9A014 251 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 M0R1X1 148 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GALR2O43603 387 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-201ENST00000252108 OR4A8P0C604 315 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 IGKV1-13P0DP09 117 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 CA6P23280 308 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 PAX9P55771 341 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 RTP5Q14D33 572 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ACSM6Q6P461 480 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 ATP5L2Q7Z4Y8 100 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 LINC01551Q86U37 167 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 GATAD1Q8WUU5 269 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 SMIM12Q96EX1 92 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 HES4Q9HCC6 221 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 NBEAQ8NFP9 2946 aa3.48□□□□□ -1.85
UBE4A-201ENST00000252108 AKAP13Q12802 2813 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 ODAMA1E959 279 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 CBY3A6NI87 242 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 ITGB1BP1O14713 200 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 CHEK1O14757 476 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 MGST3O14880 152 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 GRPP07492 148 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 STAG3L2P0CL84 134 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 G6PCP35575 357 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 IER3P46695 156 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 COMPP49747 757 aaPredicted RBP3.47□□□□□ -1.85
UBE4A-201ENST00000252108 ERVK11-1P61568 191 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 KLRB1Q12918 225 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 PDCD1Q15116 288 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 FBXW9Q5XUX1 488 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 MUC15Q8N387 334 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 MDS2Q8NDY4 140 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 HS3ST6Q96QI5 342 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 NEU1Q99519 415 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 DCTN5Q9BTE1 182 aa3.47□□□□□ -1.85
UBE4A-201ENST00000252108 LPAR2Q9HBW0 351 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms