RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 C9JQL5 133 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 APOHP02749 345 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-201ENST00000229330 REG1BP48304 166 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 RSPO4Q2I0M5 234 aaPredicted RBP11.71□□□□□ -0.53
HCFC2-201ENST00000229330 UNQ5815/PRO19632Q6UWF5 114 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 GCSAMQ8N6F7 178 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 SIGMAR1Q99720 223 aa11.71□□□□□ -0.53
HCFC2-201ENST00000229330 COX6CP09669 75 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 GFRALQ6UXV0 394 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 VKORC1L1Q8N0U8 176 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 NYNRINQ9P2P1 1898 aaKnown RBP11.71□□□□□ -0.54
HCFC2-201ENST00000229330 IGKV1D-8A0A087WSZ0 117 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 UMODP07911 640 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.54
HCFC2-201ENST00000229330 AMMECR1LQ6DCA0 310 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 SOX21Q9Y651 276 aaPredicted RBP11.7□□□□□ -0.54
HCFC2-201ENST00000229330 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 LRRC37A2A6NM11 1700 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF146Q15072 292 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 C10orf91Q5T1B1 145 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 ORAOV1Q8WV07 137 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF826PQ6ZT77 177 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 IGKV1-9A0A0C4DH69 117 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 CEACAM3P40198 252 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
HCFC2-201ENST00000229330 FOXL1Q12952 345 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 TEX38Q6PEX7 206 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 TTC9CQ8N5M4 171 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 OR5A1Q8NGJ0 315 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 MS4A5Q9H3V2 200 aa11.7□□□□□ -0.54
HCFC2-201ENST00000229330 PGPEP1LA6NFU8 196 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 TM4SF20Q53R12 229 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 FAM166AQ6J272 317 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
HCFC2-201ENST00000229330 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 SCARF2Q96GP6 870 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF257Q9Y2Q1 563 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
HCFC2-201ENST00000229330 BHLHA15Q7RTS1 189 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-201ENST00000229330 EAF1Q96JC9 268 aaPredicted RBP11.69□□□□□ -0.54
HCFC2-201ENST00000229330 JPT1Q9UK76 154 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 CHD5Q8TDI0 1954 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 CACNA1IQ9P0X4 2223 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 E9PQ18 207 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 UCP2P55851 309 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 IGKV1D-13A0A0B4J2D9 117 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 C21orf140B9A014 251 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 FAM157AC9JC47 383 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 IGKV1-13P0DP09 117 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 COX5BP10606 129 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 GNB2P62879 340 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 SLC25A45Q8N413 288 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 OSTCQ9NRP0 149 aa11.69□□□□□ -0.54
HCFC2-201ENST00000229330 A0A1W2PRD5 423 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 A0A1W2PRF3 423 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 A0A1W2PRM7 423 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 GOSR1O95249 250 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 ATP5IP56385 69 aaPredicted RBP11.68□□□□□ -0.54
HCFC2-201ENST00000229330 DMRTA2Q96SC8 542 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 PEX7O00628 323 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 RBFOX2O43251 390 aaKnown RBP eCLIP11.68□□□□□ -0.54
HCFC2-201ENST00000229330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 MRPL13Q9BYD1 178 aaKnown RBP11.68□□□□□ -0.54
HCFC2-201ENST00000229330 KLF2Q9Y5W3 355 aaPredicted RBP11.68□□□□□ -0.54
HCFC2-201ENST00000229330 TGFBR3LH3BV60 316 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 J3KRW8 73 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 OR5P3Q8WZ94 311 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 SCN8AQ9UQD0 1980 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 IGFBP2P18065 325 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 CCL1P22362 96 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 PSMG4Q5JS54 123 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 TMEM108Q6UXF1 575 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 SCN2AQ99250 2005 aa11.68□□□□□ -0.54
HCFC2-201ENST00000229330 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 EMP1P54849 157 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 OR2K2Q8NGT1 345 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 C17orf98A8MV24 154 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 C1orf174Q8IYL3 243 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
HCFC2-201ENST00000229330 MRPL16Q9NX20 251 aaKnown RBP11.67□□□□□ -0.54
HCFC2-201ENST00000229330 H3BTX0 84 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
HCFC2-201ENST00000229330 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms