RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Il18P70380 192 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 KcnrgQ2TUM3 264 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Fam57aQ5ND56 257 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 SprQ64105 261 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Wdyhv1Q80WB5 209 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Cbln4Q8BME9 198 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 PigmQ8C2R7 423 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr120Q8VFQ2 330 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1487Q8VFQ6 315 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Dmbx1Q91ZK4 381 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ms4a6cQ99N08 217 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Cst6Q9D1B1 149 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Nit2Q9JHW2 276 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Mmp24Q9R0S2 618 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Nprl2Q9WUE4 380 aa7.04□□□□□ -1.28
Trim39-205ENSMUST00000173369 Trbv26A0A0B4J1P5 115 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 6430628N08RikA0A0U1RQ45 177 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Gm8973D3YX71 104 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Sstr5O08858 362 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 MbpP04370 250 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 UbcP0CG50 734 aaKnown RBP7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Hnf1aP22361 628 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 CebpgP53568 150 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 HrkP62816 92 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ikzf2P81183 526 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1442Q0VEV7 312 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ssbp4Q3U4B1 363 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Tmprss12Q3V0Q7 336 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Znrf2Q71FD5 238 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Q80W69 301 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ahsa1Q8BK64 338 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Zfp3Q8BLB0 497 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Depp1Q8K2F3 205 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Slc25a42Q8R0Y8 318 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Vmn1r233Q8R294 319 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Plppr2Q8VCY8 343 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr127Q8VF25 323 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1132Q8VG97 308 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Lipt2Q9D009 231 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Dnajc4Q9D844 244 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ndufa9Q9DC69 377 aaKnown RBP7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Col6a5A6H584 2640 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Tcrg-V4A0A0B4J1J8 138 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Gm36368A0A1D5RLK8 91 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 4930402F06RikA2AUQ8 332 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Gm12789B1AUV7 164 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Itgb2P11835 771 aaKnown RBP7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Gabrb1P50571 474 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 KhkP97328 298 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Dus4lQ32M08 324 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 UevldQ3U1V6 471 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Psmb6Q60692 238 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Flrt1Q6RKD8 674 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Mbnl3Q8R003 342 aaKnown RBP7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Q8VE95 218 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1347Q8VF33 319 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr307Q8VFN8 313 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1451Q8VFX5 310 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1346Q8VGH6 313 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Olfr1044Q8VGR9 314 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Pdzk1ip1Q9CQH0 114 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Ms4a4cQ9D3F6 226 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Tbl1xQ9QXE7 527 aa7.03□□□□□ -1.28
Trim39-205ENSMUST00000173369 Gm42420A0A0J9YUQ2 99 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr902E9Q6Z7 309 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Dbx2F8VQH7 377 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Emg1O35130 244 aaKnown RBP7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Nipsnap1O55125 284 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Anxa7Q07076 463 aaKnown RBP7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Uhrf2Q7TMI3 803 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Slc22a20Q80UJ1 556 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 PhyhipQ8K0S0 330 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Il24Q925S4 181 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 2210010C04RikQ9CPN9 247 aaKnown RBP7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rpl22l1Q9D7S7 122 aaKnown RBP7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr455A0A0B4J1M2 317 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 9830107B12RikD3Z5D6 160 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1511E9PWU0 318 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1510E9PZZ6 318 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr373E9Q4J3 314 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm9970F6ZED4 185 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Foxf2O54743 446 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 NlkO54949 527 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Hoxa5P09021 270 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Hoxb5P09079 269 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Dhrs2Q149L0 282 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Znf575Q3TXZ1 239 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp772Q3UQL6 416 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lyg2Q3V1I0 213 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Taar9Q5QD04 348 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr924Q7TRB8 308 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr372Q7TRY2 314 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tox3Q80W03 575 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vrk3Q8K3G5 453 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr339Q8VGK8 309 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Q9D727 114 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r171Q9EPS6 316 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr926Q9EQ98 308 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Chst5Q9QUP4 395 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 GnmtQ9QXF8 293 aa7.02□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms