RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tspan7Q62283 249 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1341Q7TQV4 312 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Olfr1184Q8VG86 311 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 Dtwd2Q9D0U1 298 aa13.59□□□□□ -0.23
Ccdc88b-201ENSMUST00000113440 H2-M10.1O19443 331 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Pde6dO55057 150 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 CideaO70302 217 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Lyl1P27792 278 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr493Q8VEW5 314 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 D930007J09RikQ9D2K6 131 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ackr1Q9QUI6 334 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm21981D3Z6Q6 369 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ifna2P01573 190 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 PjvkQ0ZLH2 352 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Lrfn4Q80XU8 636 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Defb6Q91VD6 63 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mien1Q9CQ86 115 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mettl9Q9EPL4 318 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm45800A0A1B0GT24 152 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Nat8f7E0CYR6 227 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm17657E9PWY5 170 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp2P08043 459 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Chrna7P49582 502 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp7Q3TFZ4 685 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Arrdc5Q497K5 325 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Myct1Q8R411 188 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr654Q8VF27 341 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Golt1bQ9CR60 138 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Btbd17Q9DB72 478 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cacna1eQ61290 2272 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 P01915 264 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Hist1h1aP43275 213 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 P2ry1P49650 373 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ergic1Q9DC16 290 aaKnown RBP13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cldn14Q9Z0S3 239 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 CnmdQ9Z1F6 334 aa13.58□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Vmn1r113G3UWI8 307 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Wdr1O88342 606 aaKnown RBP13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Twist1P26687 206 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Adra2aQ01338 450 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Sirt7Q8BKJ9 402 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1239Q8VGM8 305 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 S1pr5Q91X56 400 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Slc25a2Q99ML6 265 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr934Q9EQ87 310 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tcf23Q9JLR5 209 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ube2l6Q9QZU9 153 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Adam10O35598 749 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fam57aQ5ND56 257 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Npy6rQ61212 371 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mettl27Q8BGM4 238 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr794Q8VF26 320 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr829Q8VGX1 321 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Map1lc3bQ9CQV6 125 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Ppp1r27Q9D119 154 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tex101Q9JMI7 250 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Igkv6-25A0A140T8N7 115 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Igkv6-32A0A140T8N9 115 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr1248A0A1L1SSZ5 307 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm20815J3KMI0 227 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm20914J3QME2 227 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rpl13aP19253 203 aaKnown RBP13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 C5ar1P30993 351 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Hes1P35428 282 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Efnb2P52800 336 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm21292Q78EE2 227 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fkbp11Q9D1M7 201 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp971A2BFG8 470 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Slc18b1D3Z5L6 459 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fam98cE9PYD1 344 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cryba1P02525 198 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp970Q08BU3 522 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 AI987944Q7TPX5 406 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Glrx5Q80Y14 152 aa13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Hnrnpa3Q8BG05 379 aaKnown RBP13.57□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cfhr1Q61406 343 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Atpaf1Q811I0 324 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gucd1Q8BZI6 239 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tmem131O70472 1877 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 6330409D20RikA2AK85 162 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tnfsf8P32972 239 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Slc25a31Q3V132 320 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr112Q8C0S2 320 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Yif1aQ91XB7 293 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Mdp1Q9D967 164 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Olfr157Q9QZ20 318 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm10778A0A087WNP5 499 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Fam53aE9PV82 402 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gp49aQ61450 303 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp747Q8BHM7 422 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Gm10762Q9CZN6 115 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 IcaQ9DBD0 700 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Pi4kaE9Q3L2 2105 aa13.56□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Zfp930A0A1D5RM15 441 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Cxcl2P10889 100 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 AtcayQ8BHE3 372 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 MrgprfQ8VCJ6 343 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Rcc1lQ9CYF5 461 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Wdr20Q9D5R2 567 aa13.55□□□□□ -0.24
Ccdc88b-201ENSMUST00000113440 Tlnrd1Q9ERE8 362 aa13.55□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 70.3 ms