RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 DMRT1Q9Y5R6 373 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 TENM3Q9P273 2699 aa12.45□□□□□ -0.42
COLCA2-207ENST00000639470 OR2A4O95047 310 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 BRI3O95415 125 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 RPL27AP46776 148 aaKnown RBP12.44□□□□□ -0.42
COLCA2-207ENST00000639470 RFX2P48378 723 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 NCS1P62166 190 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 ATP5G2Q06055 141 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 RPEL1Q2QD12 228 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 SPAG16Q8N0X2 631 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 TTC9CQ8N5M4 171 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 USMG5Q96IX5 58 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 FANCD2OSQ96PS1 177 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 OR2A7Q96R45 310 aa12.44□□□□□ -0.42
COLCA2-207ENST00000639470 S1PR2O95136 353 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 PMP2P02689 132 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 EIF4EP06730 217 aaKnown RBP12.43□□□□□ -0.42
COLCA2-207ENST00000639470 SCAND1P57086 179 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 TAS2R20P59543 309 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 C15orf32Q32M92 178 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 TIMM50Q3ZCQ8 353 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 OR4A47Q6IF82 309 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 SAMD12Q8N8I0 201 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 TSPAN14Q8NG11 270 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 CCDC140Q96MF4 163 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
COLCA2-207ENST00000639470 ZC4H2Q9NQZ6 224 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 DIABLOQ9NR28 239 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
COLCA2-207ENST00000639470 FBXL7Q9UJT9 491 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 STAB2Q8WWQ8 2551 aa12.43□□□□□ -0.42
COLCA2-207ENST00000639470 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
COLCA2-207ENST00000639470 SLC22A5O76082 557 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 ZNF735P0CB33 412 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 OR5AP2Q8NGF4 316 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 CACNG8Q8WXS5 425 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 EHFQ9NZC4 300 aa12.42□□□□□ -0.42
COLCA2-207ENST00000639470 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.41□□□□□ -0.42
COLCA2-207ENST00000639470 FAM223BA6NKX1 122 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 XRCC3O43542 346 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 OR2C1O95371 312 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 VBP1P61758 197 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 UBE2NLQ5JXB2 153 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 FAM223AQ8IWN6 122 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 NAA50Q9GZZ1 169 aaKnown RBP12.41□□□□□ -0.42
COLCA2-207ENST00000639470 FXYD6Q9H0Q3 95 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 HRASLSQ9HDD0 168 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 SLC2A9Q9NRM0 540 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 C19orf73Q9NVV2 129 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 ANAPC10Q9UM13 185 aa12.41□□□□□ -0.42
COLCA2-207ENST00000639470 A0A0A6YYH2 397 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 MFSD2BA6NFX1 497 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 A6NJ64 397 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 HLA-GP17693 338 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 GNRHRP30968 328 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 RPL8P62917 257 aaKnown RBP12.4□□□□□ -0.42
COLCA2-207ENST00000639470 AADACL3Q5VUY0 350 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 CLEC19AQ6UXS0 136 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 NECAP1Q8NC96 275 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 OR10W1Q8NGF6 305 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 GIMAP1Q8WWP7 306 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 RETNQ9HD89 108 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 ZNF257Q9Y2Q1 563 aa12.4□□□□□ -0.42
COLCA2-207ENST00000639470 A0A087WXM4 84 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 NPIPB5A8MRT5 1133 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 CREBL2O60519 120 aaPredicted RBP12.39□□□□□ -0.43
COLCA2-207ENST00000639470 RLN1P04808 185 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 CTRB1P17538 263 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 PSMB6P28072 239 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 MECP2P51608 486 aaKnown RBP12.39□□□□□ -0.43
COLCA2-207ENST00000639470 OR2B8PP59922 312 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
COLCA2-207ENST00000639470 TMEM69Q5SWH9 247 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 CTRB2Q6GPI1 263 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 ZNF2Q9BSG1 426 aaPredicted RBP12.39□□□□□ -0.43
COLCA2-207ENST00000639470 TMEM140Q9NV12 185 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 COMMD3Q9UBI1 195 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
COLCA2-207ENST00000639470 IGHV3-35A0A0C4DH35 117 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 IGLC7A0M8Q6 106 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 UPK2O00526 184 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 HRASP01112 189 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 CD7P09564 240 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 HLA-DMAP28067 261 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 HERV-K104P61576 105 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 RNASE12Q5GAN4 147 aaKnown RBP12.38□□□□□ -0.43
COLCA2-207ENST00000639470 LYSMD2Q8IV50 215 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 VSTM2AQ8TAG5 236 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 S100A16Q96FQ6 103 aaKnown RBP12.38□□□□□ -0.43
COLCA2-207ENST00000639470 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
COLCA2-207ENST00000639470 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms