RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	PPCDC	Q96CD2	204 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	CCDC124	Q96CT7	223 aa	Known RBP	3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	ZHX1-C8orf76	Q96EF9	292 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	CENPN	Q96H22	339 aa	Predicted RBP	3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	PPP3R2	Q96LZ3	170 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	SCGB3A2	Q96PL1	93 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	ZNF251	Q9BRH9	671 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	BPESC1	Q9GZL8	116 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	SYT4	Q9H2B2	425 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	OR51I1	Q9H343	314 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	UBQLN4	Q9NRR5	601 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	CBLN4	Q9NTU7	201 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	C1orf109	Q9NX04	203 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	CELA1	Q9UNI1	258 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	HSPE1-MOB4	S4R3N1	261 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	VWF	P04275	2813 aa		3.82	□□□□□ -1.8
NRXN1-223	ENST00000625891	KRBOX1	C9JBD0	128 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891		H7C2Y5	167 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	AZIN1	O14977	448 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	TRAF3IP2	O43734	574 aa	Predicted RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	EIF1B	O60739	113 aa	Known RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CPSF4	O95639	269 aa	Known RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	IGLV2-23	P01705	113 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	C1QB	P02746	253 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	S100A8	P05109	93 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CD3G	P09693	182 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	PGA5	P0DJD9	388 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	COX4I1	P13073	169 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CCL2	P13500	99 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	ME2	P23368	584 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	COL8A2	P25067	703 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	HTR2C	P28335	458 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	EIF1	P41567	113 aa	Known RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	RPL35	P42766	123 aa	Known RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	KCNJ3	P48549	501 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	SERPINB9	P50453	376 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	AQP5	P55064	265 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	OR2B8P	P59922	312 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	SPCS3	P61009	180 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	H3F3A	P84243	136 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	PRKCD	Q05655	676 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	BTN1A1	Q13410	526 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	GRK1	Q15835	563 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CLLU1	Q5K131	121 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	TIMM23B	Q5SRD1	257 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	FBXW9	Q5XUX1	488 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CYB5R2	Q6BCY4	276 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	TMPPE	Q6ZT21	453 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	ZNF429	Q86V71	674 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	COMMD7	Q86VX2	200 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	SYS1	Q8N2H4	156 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	FAM86B1	Q8N7N1	296 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	UBAC2	Q8NBM4	344 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	OR5W2	Q8NH69	310 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	RNASE11	Q8TAA1	199 aa	Known RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	LRRC29	Q8WV35	223 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	SLC7A6	Q92536	515 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	RGP1	Q92546	391 aa	Predicted RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	RDH5	Q92781	318 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CPNE4	Q96A23	557 aa	Predicted RBP	3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	TCEAL7	Q9BRU2	100 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	MND1	Q9BWT6	205 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	BEX2	Q9BXY8	128 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	REEP1	Q9H902	201 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CMTM6	Q9NX76	183 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	ANAPC11	Q9NYG5	84 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	CD300A	Q9UGN4	299 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	PSG8	Q9UQ74	426 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	BAIAP2	Q9UQB8	552 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891		V9GYY9	64 aa		3.81	□□□□□ -1.8
NRXN1-223	ENST00000625891	TMED7-TICAM2	A0A0A6YYA0	188 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	IGHV3-66	A0A0C4DH42	116 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	LRRN3	E7EW58	273 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891		H7C417	338 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	SGCE	O43556	437 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	SLC16A7	O60669	478 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	NDUFS6	O75380	124 aa	Known RBP	3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	RBBP9	O75884	186 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	GABARAP	O95166	117 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	PTH	P01270	115 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	IFNA7	P01567	189 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	CECR9	P0C854	216 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	PGA4	P0DJD7	388 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	PGA3	P0DJD8	388 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	IFI30	P13284	250 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	SPN	P16150	400 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	HLA-DMA	P28067	261 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	HTR1D	P28221	377 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	IDH2	P48735	452 aa	Known RBP	3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	EFNA4	P52798	201 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	SYNJ2BP	P57105	145 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	DNAJB13	P59910	316 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	GABARAPL2	P60520	117 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	RPS23	P62266	143 aa	Known RBP	3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	RPL18A	Q02543	176 aa	Known RBP	3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	ST3GAL4	Q11206	333 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	ERCC8	Q13216	396 aa		3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	ZNHIT3	Q15649	155 aa	Predicted RBP	3.8	□□□□□ -1.8
NRXN1-223	ENST00000625891	MPPED2	Q15777	294 aa		3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms