RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 EXOSC2Q13868 293 aaKnown RBP10.21□□□□□ -0.77
SNX1-214ENST00000625244 ANKRD55Q3KP44 614 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 SIGIRRQ6IA17 410 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 KIR2DL5AQ8N109 375 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 OR10R2Q8NGX6 335 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 KIR2DL5BQ8NHK3 375 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 ACOT12Q8WYK0 555 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 CYYR1Q96J86 154 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 RNF5Q99942 180 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 FAAP24Q9BTP7 215 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 RIMS4Q9H426 269 aaPredicted RBP10.21□□□□□ -0.77
SNX1-214ENST00000625244 RHBDL2Q9NX52 303 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 JPT1Q9UK76 154 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 SPATA2Q9UM82 520 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 WASHC3Q9Y3C0 194 aa10.21□□□□□ -0.77
SNX1-214ENST00000625244 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.2□□□□□ -0.78
SNX1-214ENST00000625244 PPP5D1E7EU14 171 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 YPEL1O60688 119 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 CD3GP09693 182 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 APELAP0DMC3 54 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 RPL35AP18077 110 aaKnown RBP10.2□□□□□ -0.78
SNX1-214ENST00000625244 FAM71F2Q6NXP2 309 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 MZT2AQ6P582 158 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 MOB1BQ7L9L4 216 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 GAPTQ8N292 157 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 SETD6Q8TBK2 473 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 ARHGAP5-AS1Q96IT6 56 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 YPEL2Q96QA6 119 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 CMSS1Q9BQ75 279 aaKnown RBP10.2□□□□□ -0.78
SNX1-214ENST00000625244 SULT4A1Q9BR01 284 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 PECRQ9BY49 303 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 C11orf68Q9H3H3 251 aaKnown RBP10.2□□□□□ -0.78
SNX1-214ENST00000625244 AKIP1Q9NQ31 210 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 C12orf4Q9NQ89 552 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 UBQLN2Q9UHD9 624 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 MGAT4AQ9UM21 535 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 DMRT1Q9Y5R6 373 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 VPS13BQ7Z7G8 4022 aa10.2□□□□□ -0.78
SNX1-214ENST00000625244 A0A075B6Q4 140 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 A0A0A6YYD4 124 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 A0A0A6YYH2 397 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 A6NJ64 397 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 C16orf90A8MZG2 172 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 DEFB4AO15263 64 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 ST8SIA5O15466 376 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 IGKV1-16P04430 117 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 HIST1H1DP16402 221 aaKnown RBP10.19□□□□□ -0.78
SNX1-214ENST00000625244 MC5RP33032 325 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 TALDO1P37837 337 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 RPS16P62249 146 aaKnown RBP10.19□□□□□ -0.78
SNX1-214ENST00000625244 ARFRP1Q13795 201 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 UBE2NLQ5JXB2 153 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 OR2AK2Q8NG84 335 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 OR5AN1Q8NGI8 311 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 S100A16Q96FQ6 103 aaKnown RBP10.19□□□□□ -0.78
SNX1-214ENST00000625244 TMEM68Q96MH6 324 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 RARRES2Q99969 163 aa10.19□□□□□ -0.78
SNX1-214ENST00000625244 TMEM213A2RRL7 107 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 LGALS9O00182 355 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 SPDEFO95238 335 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 OR2C1O95371 312 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 PRH1P02810 166 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 ZNF182P17025 639 aaPredicted RBP10.18□□□□□ -0.78
SNX1-214ENST00000625244 RHOGP84095 191 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 PLA2G7Q13093 441 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 LGALS9BQ3B8N2 356 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 LY6G6FQ5SQ64 297 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 ZNF554Q86TJ5 538 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 POM121L12Q8N7R1 296 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 SAMD12Q8N8I0 201 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 UXS1Q8NBZ7 420 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 ADAD2Q8NCV1 583 aaKnown RBP10.18□□□□□ -0.78
SNX1-214ENST00000625244 OR1L6Q8NGR2 347 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 TSNAXQ99598 290 aaKnown RBP10.18□□□□□ -0.78
SNX1-214ENST00000625244 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 COMMD3Q9UBI1 195 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 AK3Q9UIJ7 227 aa10.18□□□□□ -0.78
SNX1-214ENST00000625244 IGHV4-4A0A075B6R2 117 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 SMIM31A0A1B0GVY4 71 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 RAB27BO00194 218 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 RAB29O14966 203 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 GNB3P16520 340 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 TMEM50BP56557 158 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 LINC00205P59089 165 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 HTD2P86397 168 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 BTNL8Q6UX41 500 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 OR2C3Q8N628 320 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
SNX1-214ENST00000625244 GALMQ96C23 342 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 PIPOXQ9P0Z9 390 aa10.17□□□□□ -0.78
SNX1-214ENST00000625244 RSL24D1Q9UHA3 163 aaKnown RBP10.17□□□□□ -0.78
SNX1-214ENST00000625244 FOXI3A8MTJ6 420 aaPredicted RBP10.16□□□□□ -0.78
SNX1-214ENST00000625244 C11orf94C9JXX5 98 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 H3BMQ9 156 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 MFNGO00587 321 aa10.16□□□□□ -0.78
SNX1-214ENST00000625244 S1PR2O95136 353 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms