RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ERVK-16P61578 105 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 TNXAQ16473 311 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 ECSCRQ19T08 205 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 MRGPRG-AS1Q2M3A8 158 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 OR4A47Q6IF82 309 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 MMD2Q8IY49 270 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 TMEM167AQ8TBQ9 72 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 CCDC32Q9BV29 185 aa14.6□□□□□ -0.07
CIRBP-245ENST00000621399 WDR12Q9GZL7 423 aaKnown RBP14.6□□□□□ -0.07
CIRBP-245ENST00000621399 KRASP01116 189 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 EGR2P11161 476 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-245ENST00000621399 SSBP2P81877 361 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-245ENST00000621399 TMEM267Q0VDI3 215 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-245ENST00000621399 ZNF846Q147U1 533 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 POU2AF1Q16633 256 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 TEX38Q6PEX7 206 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 OR4A5Q8NH83 315 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 SGMS2Q8NHU3 365 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 TP53RKQ96S44 253 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 CITED2Q99967 270 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-245ENST00000621399 SLC25A21Q9BQT8 299 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-245ENST00000621399 BET1LQ9NYM9 111 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 VSIG4Q9Y279 399 aa14.59□□□□□ -0.07
CIRBP-245ENST00000621399 TCRBV4S1A1TA0A5B7 111 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 MARCH11A6NNE9 402 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 CD40LGP29965 261 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 G6PCP35575 357 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 CFHR3Q02985 330 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 SP6Q3SY56 376 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 TCTEX1D4Q5JR98 221 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 COMMD1Q8N668 190 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 LFNGQ8NES3 379 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 C7orf50Q9BRJ6 194 aaKnown RBP14.58□□□□□ -0.08
CIRBP-245ENST00000621399 NAA60Q9H7X0 242 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 TMEM140Q9NV12 185 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 NUBP2Q9Y5Y2 271 aa14.58□□□□□ -0.08
CIRBP-245ENST00000621399 B3GALNT1O75752 331 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 PPIFP30405 207 aaKnown RBP14.57□□□□□ -0.08
CIRBP-245ENST00000621399 CCR6P51684 374 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 CRIP2P52943 208 aaPredicted RBP14.57□□□□□ -0.08
CIRBP-245ENST00000621399 RPL8P62917 257 aaKnown RBP14.57□□□□□ -0.08
CIRBP-245ENST00000621399 CD83Q01151 205 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 AKIRIN2Q53H80 203 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 UNQ5815/PRO19632Q6UWF5 114 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 MINDY2Q8NBR6 621 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 ADAD2Q8NCV1 583 aaKnown RBP14.57□□□□□ -0.08
CIRBP-245ENST00000621399 PHB2Q99623 299 aa14.57□□□□□ -0.08
CIRBP-245ENST00000621399 MSGN1A6NI15 193 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 CRYM-AS1A6NIL9 109 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 UPK2O00526 184 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 IGHG4P01861 327 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 OPN1MWP04001 364 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 OPN1MW2P0DN77 364 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 OPN1MW3P0DN78 364 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 AKR1C4P17516 323 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 MAS1LP35410 378 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 FOXE3Q13461 319 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 TRIM16LQ309B1 348 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 KHDC1LQ5JSQ8 128 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 TMED4Q7Z7H5 227 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 SGPP2Q8IWX5 399 aa14.56□□□□□ -0.08
CIRBP-245ENST00000621399 SRSF12Q8WXF0 261 aaKnown RBP14.56□□□□□ -0.08
CIRBP-245ENST00000621399 TRAV3A0A0B4J244 114 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 A0A1W2PN81 502 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 M0QZ24 198 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 PLA2G10O15496 165 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 IGKV1-39P01597 117 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 IGKV1D-39P04432 117 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 ELANEP08246 267 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 IL6RP08887 468 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-245ENST00000621399 OR5AC1P0C628 307 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 HLA-GP17693 338 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 CHRNA7P36544 502 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 RBMS2Q15434 407 aaKnown RBP14.55□□□□□ -0.08
CIRBP-245ENST00000621399 NSUN5P1Q3KNT7 163 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 C19orf54Q5BKX5 351 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 CXorf66Q5JRM2 361 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-245ENST00000621399 C10orf55Q5SWW7 151 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 TMEM65Q6PI78 240 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 NDUFA11Q86Y39 141 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 TMEM230Q96A57 120 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 FOXA2Q9Y261 457 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-245ENST00000621399 KCNIP3Q9Y2W7 256 aa14.55□□□□□ -0.08
CIRBP-245ENST00000621399 TSSC4Q9Y5U2 329 aaPredicted RBP14.55□□□□□ -0.08
CIRBP-245ENST00000621399 A0A1W2PRX2 142 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 SNAPC5O75971 98 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 ATG12O94817 140 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 APELAP0DMC3 54 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 PF4V1P10720 104 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 UCP1P25874 307 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 RPL27AP46776 148 aaKnown RBP14.54□□□□□ -0.08
CIRBP-245ENST00000621399 DHODHQ02127 395 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 C2orf68Q2NKX9 166 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 H2BFWTQ7Z2G1 175 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 SEC22AQ96IW7 307 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 TMEM68Q96MH6 324 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 FYTTD1Q96QD9 318 aaKnown RBP14.54□□□□□ -0.08
CIRBP-245ENST00000621399 SPIN2AQ99865 258 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 SPIN2BQ9BPZ2 258 aa14.54□□□□□ -0.08
CIRBP-245ENST00000621399 TMEM222Q9H0R3 208 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms