RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 STAC2Q6ZMT1 411 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
SRRT-216ENST00000618262 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 FAM219AQ8IW50 185 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 MRAPQ8TCY5 172 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 NABP1Q96AH0 204 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 VKORC1Q9BQB6 163 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ABHD6Q9BV23 337 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 A0A087WX48 190 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 IFITM5A6NNB3 132 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 CLDN34H7C241 214 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 CGAP01215 116 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
SRRT-216ENST00000618262 SLC25A35Q3KQZ1 300 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 APOBEC3DQ96AK3 386 aaPredicted RBP10.14□□□□□ -0.79
SRRT-216ENST00000618262 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 TAF9BQ9HBM6 251 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 RAB9BQ9NP90 201 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 FZR1Q9UM11 496 aa10.14□□□□□ -0.79
SRRT-216ENST00000618262 ARHGAP21Q5T5U3 1957 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 IGLC7A0M8Q6 106 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 RS1O15537 224 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 IGLC1P0CG04 106 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 NPBWR2P48146 333 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 SUMO1P63165 101 aaKnown RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 ZNF85Q03923 595 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 PLP2Q04941 152 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 ZNF787Q6DD87 383 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 ZNF322Q6U7Q0 402 aaPredicted RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 PNKDQ8N490 385 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 OR2AJ1Q8NGZ0 328 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 OR5AK2Q8NH90 309 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 OR5B12Q96R08 314 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 IMMP2LQ96T52 175 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 MBNL3Q9NUK0 354 aaKnown RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 OR1A1Q9P1Q5 309 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 IGHV3-64DA0A0J9YX35 117 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 USF1P22415 310 aaPredicted RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 CD34P28906 385 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 MEF2BQ02080 365 aaPredicted RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 DOPEY1Q5JWR5 2465 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 Q6ZT83 130 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 SYS1Q8N2H4 156 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 VN1R17PQ8TDU5 208 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 TMEM170AQ8WVE7 144 aa10.13□□□□□ -0.79
SRRT-216ENST00000618262 HEATR1Q9H583 2144 aaKnown RBP10.13□□□□□ -0.79
SRRT-216ENST00000618262 TRAV8-7A0A075B6U6 113 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 A0A0G2JK05 382 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 KIAA1324LA8MWY0 1029 aaPredicted RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 RAB27BO00194 218 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 TAX1BP3O14907 124 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 FOXH1O75593 365 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 TSPOP30536 169 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 CX3CR1P49238 355 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 SLC25A1P53007 311 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 MRPS34P82930 218 aaKnown RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 GUSBP1Q15486 140 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 POU2AF1Q16633 256 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 ACOT6Q3I5F7 207 aaPredicted RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 FA2HQ7L5A8 372 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 MDP1Q86V88 176 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 OR10S1Q8NGN2 331 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 ELOVL3Q9HB03 270 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 FGF20Q9NP95 211 aaPredicted RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 PLCE1Q9P212 2302 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 C5orf49A4QMS7 147 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 HMGB3O15347 200 aaKnown RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 PRTN3P24158 256 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 COL8A1P27658 744 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 OPRM1P35372 400 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
SRRT-216ENST00000618262 PSG4Q00888 419 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 RAB40BQ12829 278 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 FAM27D1Q5T7N8 215 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 KLHDC1Q8N7A1 406 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 UHRF2Q96PU4 802 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 PDCD1LG2Q9BQ51 273 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 CABLES2Q9BTV7 478 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 ZNF581Q9P0T4 197 aa10.12□□□□□ -0.79
SRRT-216ENST00000618262 A0A1W2PRE2 83 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 PF4P02776 101 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 CTRLP40313 264 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 MDH2P40926 338 aaKnown RBP10.11□□□□□ -0.79
SRRT-216ENST00000618262 IAH1Q2TAA2 248 aaPredicted RBP10.11□□□□□ -0.79
SRRT-216ENST00000618262 ZNF260Q3ZCT1 412 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 UBE2NLQ5JXB2 153 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.11□□□□□ -0.79
SRRT-216ENST00000618262 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 NOP16Q9Y3C1 178 aaKnown RBP10.11□□□□□ -0.79
SRRT-216ENST00000618262 SIRT4Q9Y6E7 314 aaPredicted RBP10.11□□□□□ -0.79
SRRT-216ENST00000618262 J3QR06 171 aa10.11□□□□□ -0.79
SRRT-216ENST00000618262 K7EN84 100 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms