RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 OR8B8Q15620 311 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 C6orf201Q7Z4U5 140 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 LRTM2Q8N967 370 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 NANOS1Q8WY41 292 aaKnown RBP13.37□□□□□ -0.27
RTN1-209ENST00000611068 COL6A6A6NMZ7 2263 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
RTN1-209ENST00000611068 IGHV1-69-2A0A0G2JMI3 117 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 ZNF816-ZNF321PA0A0X1KG74 233 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 CORTO00230 105 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 CA6P23280 308 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 NPBWR2P48146 333 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 HS3ST6Q96QI5 342 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 GP6Q9HCN6 339 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 TP73-AS1Q9UF72 201 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
RTN1-209ENST00000611068 MRPS16Q9Y3D3 137 aaKnown RBP13.37□□□□□ -0.27
RTN1-209ENST00000611068 DUXBA0A1W2PPF3 345 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 ZNF728P0DKX0 622 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 NIT1Q86X76 327 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 WDR31Q8NA23 367 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 ZC2HC1AQ96GY0 325 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 GAGE12BA1L429 117 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 CD300LBA8K4G0 201 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 RNF212BA8MTL3 300 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 HMGB3O15347 200 aaKnown RBP13.36□□□□□ -0.27
RTN1-209ENST00000611068 LGALS7P47929 136 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 HOXA4Q00056 320 aaPredicted RBP13.36□□□□□ -0.27
RTN1-209ENST00000611068 MEF2BQ02080 365 aaPredicted RBP13.36□□□□□ -0.27
RTN1-209ENST00000611068 CNN3Q15417 329 aaKnown RBP13.36□□□□□ -0.27
RTN1-209ENST00000611068 TBC1D28Q2M2D7 210 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 AMMECR1LQ6DCA0 310 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 ZNF488Q96MN9 340 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 PLSCR4Q9NRQ2 329 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 DECR2Q9NUI1 292 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
RTN1-209ENST00000611068 A6NJY4 79 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 ESDP10768 282 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
RTN1-209ENST00000611068 ZNF474Q6S9Z5 364 aaPredicted RBP13.35□□□□□ -0.27
RTN1-209ENST00000611068 GFRALQ6UXV0 394 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 Q6ZSR3 168 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 SPSB4Q96A44 273 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 H3BP45 60 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 CGAP01215 116 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 CRISP2P16562 243 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 CBLN1P23435 193 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 BAGE3Q86Y29 109 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 BAGE2Q86Y30 109 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 ZNF611Q8N823 705 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 OR52L2PQ8NGH6 319 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 IL36RNQ9UBH0 155 aa13.35□□□□□ -0.27
RTN1-209ENST00000611068 ROS1P08922 2347 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 ECI1P42126 302 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 PPP1CBP62140 327 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 TMEM42Q69YG0 159 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 SIGLECL1Q8N7X8 197 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 MRPL30Q8TCC3 161 aaKnown RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 ELOVL5Q9NYP7 299 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 ESPL1Q14674 2120 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 ITPR1Q14643 2758 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 HSPB6O14558 160 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 TAX1BP3O14907 124 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 ZNF83P51522 516 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 TMPRSS3P57727 454 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 FAM27E3Q08E93 113 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 C22orf34Q6ZV56 151 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 DOLPP1Q86YN1 238 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 OR4F17Q8NGA8 305 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 SPSB1Q96BD6 273 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 OR4F4Q96R69 305 aa13.34□□□□□ -0.27
RTN1-209ENST00000611068 TBL2Q9Y4P3 447 aaKnown RBP13.34□□□□□ -0.27
RTN1-209ENST00000611068 FOXI3A8MTJ6 420 aaPredicted RBP13.33□□□□□ -0.28
RTN1-209ENST00000611068 HS3ST1O14792 307 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 OPRM1P35372 400 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 ZNF286AQ9HBT8 521 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
RTN1-209ENST00000611068 FABP6P51161 128 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 FUT6P51993 359 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 BHLHA15Q7RTS1 189 aaPredicted RBP13.33□□□□□ -0.28
RTN1-209ENST00000611068 FAM57AQ8TBR7 257 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 SELENOKQ9Y6D0 94 aa13.33□□□□□ -0.28
RTN1-209ENST00000611068 SYNGR1O43759 233 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 GNG7O60262 68 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 GPX1P07203 203 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 CECR9P0C854 216 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 BCL3P20749 454 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 MPV17P39210 176 aa13.32□□□□□ -0.28
RTN1-209ENST00000611068 LHFPL2Q6ZUX7 228 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms