RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 PPP1R27Q86WC6 154 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 LGI3Q8N145 548 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 OR52B4Q8NGK2 314 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 CASTOR1Q8WTX7 329 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 OR2A7Q96R45 310 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 RASL11BQ9BPW5 248 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 SEC22CQ9BRL7 303 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF702PQ9H963 129 aa10.02□□□□□ -0.81
CHMP2A-206ENST00000600118 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 IGHV7-81A0A0B4J1V7 117 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 A0A0B4J2A0 478 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 UPK2O00526 184 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 PRAF2O60831 178 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 ATG12O94817 140 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 KBTBD11O94819 623 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 NDUFA7O95182 113 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 IGHG2P01859 326 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 FGF2P09038 288 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF695Q8IW36 515 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 SLC35G3Q8N808 338 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 DMBX1Q8NFW5 382 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF431Q8TF32 576 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 CHPT1Q8WUD6 406 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 MITD1Q8WV92 249 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 PRSS22Q9GZN4 317 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 SHPKQ9UHJ6 478 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 MMP24Q9Y5R2 645 aa10.01□□□□□ -0.81
CHMP2A-206ENST00000600118 TRAV3A0A0B4J244 114 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 A0A0B4J293 547 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 PIGBOS1A0A0B4J2F0 54 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 A0A0G2JRQ6 117 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 DUXBA0A1W2PPF3 345 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 C7orf66A4D0T2 115 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 DHFRP00374 187 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 CA2P00918 260 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 OR9G9P0C7N8 305 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 CX3CL1P78423 397 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 NDPQ00604 133 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 PLGLAQ15195 96 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 NMSQ5H8A3 153 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 LYZL2Q7Z4W2 148 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 FAM219AQ8IW50 185 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 MMD2Q8IY49 270 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 COQ8AQ8NI60 647 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 TAF15Q92804 592 aaKnown RBP eCLIP10□□□□□ -0.81
CHMP2A-206ENST00000600118 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
CHMP2A-206ENST00000600118 C16orf95Q9H693 158 aa10□□□□□ -0.81
CHMP2A-206ENST00000600118 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 DBX1A6NMT0 343 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 SNRPGP15A8MWD9 76 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 CREBL2O60519 120 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 CRYBA1P05813 215 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 HKR1P10072 659 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 VDAC1P21796 283 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 AKR1C2P52895 323 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 RPL8P62917 257 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 IZUMO4Q1ZYL8 232 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 Q6ZRM9 215 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 H2BFWTQ7Z2G1 175 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 MINDY2Q8NBR6 621 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 GPR146Q96CH1 333 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 RRNAD1Q96FB5 475 aaKnown RBP9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 CLCC1Q96S66 551 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 OR51J1Q9H342 316 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
CHMP2A-206ENST00000600118 KCNAB3O43448 404 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 IGF1P05019 195 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 HLA-GP17693 338 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 MAS1LP35410 378 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 FXYD3Q14802 87 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 TATDN3Q17R31 274 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 KRTAP24-1Q3LI83 254 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 AARDQ4LEZ3 155 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 C9orf152Q5JTZ5 239 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 SLC35E3Q7Z769 313 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 C12orf45Q8N5I9 185 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 PHB2Q99623 299 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 GPN1Q9HCN4 374 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 SERTAD4Q9NUC0 356 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 TMEM14BQ9NUH8 114 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 FOXA2Q9Y261 457 aaPredicted RBP9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 FBXO7Q9Y3I1 522 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 TMED3Q9Y3Q3 217 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 ATRQ13535 2644 aa9.98□□□□□ -0.81
CHMP2A-206ENST00000600118 A0A1B0GW64 132 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 C15orf61A6NNL5 157 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 ADAP1O75689 374 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 SNAPC5O75971 98 aa9.97□□□□□ -0.81
CHMP2A-206ENST00000600118 MYOD1P15172 320 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms