RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZNF182P17025 639 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-204ENST00000599398 HRH1P35367 487 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 ZNF429Q86V71 674 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 PUSL1Q8N0Z8 303 aaKnown RBP17.41■□□□□ 0.38
CCDC9-204ENST00000599398 TMEM167AQ8TBQ9 72 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 MOB3AQ96BX8 217 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 PRR25Q96S07 402 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 SCPEP1Q9HB40 452 aa17.41■□□□□ 0.38
CCDC9-204ENST00000599398 RANGRFQ9HD47 186 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-204ENST00000599398 BRI3O95415 125 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 GNRHRP30968 328 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 RPL27AP46776 148 aaKnown RBP17.4■□□□□ 0.38
CCDC9-204ENST00000599398 LYSMD2Q8IV50 215 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 OR6F1Q8NGZ6 308 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 USMG5Q96IX5 58 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 FYTTD1Q96QD9 318 aaKnown RBP17.4■□□□□ 0.38
CCDC9-204ENST00000599398 AIFM2Q9BRQ8 373 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 HRASLSQ9HDD0 168 aa17.4■□□□□ 0.38
CCDC9-204ENST00000599398 HMX3A6NHT5 357 aa17.39■□□□□ 0.37
CCDC9-204ENST00000599398 RBFOX2O43251 390 aaKnown RBP eCLIP17.39■□□□□ 0.37
CCDC9-204ENST00000599398 LY86O95711 162 aa17.39■□□□□ 0.37
CCDC9-204ENST00000599398 PRH1P02810 166 aa17.39■□□□□ 0.37
CCDC9-204ENST00000599398 ALDH3B2P48448 385 aa17.39■□□□□ 0.37
CCDC9-204ENST00000599398 TSPAN5P62079 268 aa17.39■□□□□ 0.37
CCDC9-204ENST00000599398 DCTN2Q13561 401 aaKnown RBP17.39■□□□□ 0.37
CCDC9-204ENST00000599398 DPPA5A6NC42 116 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 HPRT1P00492 218 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 RLN1P04808 185 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 ZP3P21754 424 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 RCVRNP35243 200 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 MAS1LP35410 378 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 RPL8P62917 257 aaKnown RBP17.38■□□□□ 0.37
CCDC9-204ENST00000599398 RNASE12Q5GAN4 147 aaKnown RBP17.38■□□□□ 0.37
CCDC9-204ENST00000599398 OR4A47Q6IF82 309 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 SLC25A42Q86VD7 318 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 TTC9CQ8N5M4 171 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 CD300LFQ8TDQ1 290 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 ADAM30Q9UKF2 790 aa17.38■□□□□ 0.37
CCDC9-204ENST00000599398 ZNF256Q9Y2P7 627 aaPredicted RBP17.38■□□□□ 0.37
CCDC9-204ENST00000599398 RBMXL2O75526 392 aaKnown RBP17.37■□□□□ 0.37
CCDC9-204ENST00000599398 NQO2P16083 231 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 TAS2R31P59538 309 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 RHOGP84095 191 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 ACSM6Q6P461 480 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 CMTM1Q8IZ96 169 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 OR4A5Q8NH83 315 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 FXYD6Q9H0Q3 95 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 AKIP1Q9NQ31 210 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 BET1LQ9NYM9 111 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 EXTL2Q9UBQ6 330 aa17.37■□□□□ 0.37
CCDC9-204ENST00000599398 PEF1Q9UBV8 284 aaKnown RBP17.37■□□□□ 0.37
CCDC9-204ENST00000599398 FAM223BA6NKX1 122 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 TEX22C9J3V5 150 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 PGLYRP1O75594 196 aaPredicted RBP17.36■□□□□ 0.37
CCDC9-204ENST00000599398 S1PR2O95136 353 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 IL6RP08887 468 aaPredicted RBP17.36■□□□□ 0.37
CCDC9-204ENST00000599398 CD69Q07108 199 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 ZNF343Q6P1L6 599 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 CLVS1Q8IUQ0 354 aaPredicted RBP17.36■□□□□ 0.37
CCDC9-204ENST00000599398 FAM223AQ8IWN6 122 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 DMBX1Q8NFW5 382 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 OR4C12Q96R67 309 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 ELOVL1Q9BW60 279 aa17.36■□□□□ 0.37
CCDC9-204ENST00000599398 E7EUB6 86 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 GPR31O00270 319 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 MYOD1P15172 320 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 RPA2P15927 270 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 HLA-GP17693 338 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 ZNF45Q02386 682 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 ATP5G2Q06055 141 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 PLEKHA2Q9HB19 425 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 ZNF257Q9Y2Q1 563 aa17.35■□□□□ 0.37
CCDC9-204ENST00000599398 RGS5O15539 181 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 TRBV12-3P01733 135 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 ZNF735P0CB33 412 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 EXOSC2Q13868 293 aaKnown RBP17.34■□□□□ 0.37
CCDC9-204ENST00000599398 SPCS2Q15005 226 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 RSRP1Q9BUV0 290 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 SLC2A9Q9NRM0 540 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 TMEM140Q9NV12 185 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 COMMD9Q9P000 198 aa17.34■□□□□ 0.37
CCDC9-204ENST00000599398 TRBV9A0A0B4J1U6 114 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 TRAV3A0A0B4J244 114 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 A0A1B0GW64 132 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 OR2J3O76001 311 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 F2RP25116 425 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 S100GP29377 79 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 ERVK-16P61578 105 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 PHLDA2Q53GA4 152 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 C19orf35Q6ZS72 473 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 NECAP1Q8NC96 275 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 OR6Q1Q8NGQ2 317 aa17.33■□□□□ 0.36
CCDC9-204ENST00000599398 DGCR14Q96DF8 476 aaKnown RBP17.33■□□□□ 0.36
CCDC9-204ENST00000599398 NPIPB5A8MRT5 1133 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 M0QYG6 137 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 UPK2O00526 184 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 AREGP15514 252 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 LPAR6P43657 344 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 SYNJ2BPP57105 145 aa17.32■□□□□ 0.36
CCDC9-204ENST00000599398 KLF5Q13887 457 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms