RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SCGB2B2Q4G0G5 96 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 FAM71F2Q6NXP2 309 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 ODF3L1Q8IXM7 274 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 TRIM63Q969Q1 353 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 MCUBQ9NWR8 336 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 GAB2Q9UQC2 676 aa12.64□□□□□ -0.39
SHKBP1-215ENST00000597649 IGKV1D-13A0A0B4J2D9 117 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 M0R1X1 148 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 IGKV1-13P0DP09 117 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 CD40LGP29965 261 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 C5orf64Q2M2E5 130 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 LPCAT3Q6P1A2 487 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 ZNF645Q8N7E2 425 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 OR4D10Q8NGI6 311 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 OR4C16Q8NGL9 310 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 BORCS5Q969J3 196 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 MOB3AQ96BX8 217 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 SDHCQ99643 169 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 MRPL20Q9BYC9 149 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 SDHAF2Q9NX18 166 aa12.63□□□□□ -0.39
SHKBP1-215ENST00000597649 LINC00854A0A1B0GVQ3 168 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 EGR2P11161 476 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 IL7P13232 177 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 PGAM2P15259 253 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 KLF9Q13886 244 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 LIN54Q6MZP7 749 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 FAAP20Q6NZ36 180 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 NPBQ8NG41 125 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 DEDD2Q8WXF8 326 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 PRRT1Q99946 306 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 NABP2Q9BQ15 211 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 CCL28Q9NRJ3 127 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 SCP2D1Q9UJQ7 156 aa12.62□□□□□ -0.39
SHKBP1-215ENST00000597649 CENPXA8MT69 81 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 A8MZ25 164 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 NBR2O15453 112 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 IGHV3-11P01762 117 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 S100GP29377 79 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 ECSCRQ19T08 205 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 DRAXINQ8NBI3 349 aaPredicted RBP12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 HRASLSQ9HDD0 168 aa12.61□□□□□ -0.39
SHKBP1-215ENST00000597649 A0A1W2PN81 502 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 OR5H14A6NHG9 310 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 H7C2Y5 167 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 FCN1O00602 326 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 NDUFA3O95167 84 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 CHRNA7P36544 502 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 CRIP2P52943 208 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 CMTM1Q8IZ96 169 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 OR51S1Q8NGJ8 323 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 OR4C12Q96R67 309 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 FXYD6Q9H0Q3 95 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 FOXA2Q9Y261 457 aaPredicted RBP12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
SHKBP1-215ENST00000597649 KMT2AQ03164 3969 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 NAP1L6A6NFF2 107 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 IGLV1-51P01701 117 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 APOA2P02652 100 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 CT45A6P0DMU7 189 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 CT45A5P0DMU8 189 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 CT45A7P0DMV0 189 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 MC5RP33032 325 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 UCP3P55916 312 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 CX3CL1P78423 397 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 CBX3Q13185 183 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 MSMO1Q15800 293 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 HAGHQ16775 308 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 SLC38A6Q8IZM9 456 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 RHOVQ96L33 236 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 TSC22D3Q99576 134 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 KIAA1456Q9P272 454 aa12.59□□□□□ -0.39
SHKBP1-215ENST00000597649 HERC2O95714 4834 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 GPR31O00270 319 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 TNFSF12O43508 249 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 PROP1O75360 226 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 GNRHRP30968 328 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 CATR1Q13166 79 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 AADACL3Q5VUY0 350 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 LHFPL1Q86WI0 220 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 TCTEX1D2Q8WW35 142 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 C5orf30Q96GV9 206 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 MS4A10Q96PG2 267 aa12.58□□□□□ -0.4
SHKBP1-215ENST00000597649 SCGB3A2Q96PL1 93 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms