RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RAB13P51153 203 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR2B8PP59922 312 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 DEFA5Q01523 94 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 ARL16Q0P5N6 197 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 LYPD2Q6UXB3 125 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 DTX2Q86UW9 622 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 PDPNQ86YL7 162 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR8B3Q8NGG8 313 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR13D1Q8NGV5 346 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 C8orf46Q8TAG6 207 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 MBD3L1Q8WWY6 194 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 NEIL1Q96FI4 390 aaPredicted RBP8.51□□□□□ -1.05
VPS25-203ENST00000589520 OR8B2Q96RD0 313 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 HEYLQ9NQ87 328 aaPredicted RBP8.51□□□□□ -1.05
VPS25-203ENST00000589520 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 CTSZQ9UBR2 303 aa8.51□□□□□ -1.05
VPS25-203ENST00000589520 A0A1W2PPE3 182 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 INS-IGF2F8WCM5 200 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 MMP23AO75900 390 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 IFNA10P01566 189 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 ARG1P05089 322 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 CCL3L1P16619 93 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 VDAC2P45880 294 aaPredicted RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 LGALS7P47929 136 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 DLK1P80370 383 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 SP5Q6BEB4 398 aaPredicted RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 OR4A47Q6IF82 309 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 C11orf71Q6IPW1 123 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 ZNF709Q8N972 641 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 OR4C13Q8NGP0 309 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 OR5B3Q8NH48 314 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 LEAP2Q969E1 77 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 LHX4Q969G2 390 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 FLYWCH2Q96CP2 140 aaKnown RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 EIF5A2Q9GZV4 153 aaKnown RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 TMEM133Q9H2Q1 129 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 KCNIP2Q9NS61 270 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 TCF19Q9Y242 345 aa8.5□□□□□ -1.05
VPS25-203ENST00000589520 UTP20O75691 2785 aaKnown RBP8.5□□□□□ -1.05
VPS25-203ENST00000589520 RBFOX3A6NFN3 312 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 KBTBD11O94819 623 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 IGHV3-7P01780 117 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 MDKP21741 143 aaPredicted RBP8.49□□□□□ -1.05
VPS25-203ENST00000589520 HOXA1P49639 335 aaPredicted RBP8.49□□□□□ -1.05
VPS25-203ENST00000589520 LINC00205P59089 165 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 KHDC3LQ587J8 217 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 ZNF841Q6ZN19 808 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 C1orf229Q6ZS94 237 aaPredicted RBP8.49□□□□□ -1.05
VPS25-203ENST00000589520 SSX9Q7RTT3 188 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 BEND2Q8NDZ0 799 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 RNF5Q99942 180 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 SLC35B3Q9H1N7 401 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 CHODLQ9H9P2 273 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 AMMECR1Q9Y4X0 333 aaPredicted RBP8.49□□□□□ -1.05
VPS25-203ENST00000589520 DSCAMO60469 2012 aa8.49□□□□□ -1.05
VPS25-203ENST00000589520 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 H0YJW9 148 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 H7C2Y5 167 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 AGPAT2O15120 278 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 CYB5BO43169 146 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 FCN3O75636 299 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 TSPAN9O75954 239 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 IFNA1P01562 189 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 USF1P22415 310 aaPredicted RBP8.48□□□□□ -1.05
VPS25-203ENST00000589520 CD1BP29016 333 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 FHITP49789 147 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 ERVFRD-1P60508 538 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 PRCDQ00LT1 54 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 RUNX1Q01196 453 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 CDSNQ15517 529 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 RBMS3Q6XE24 437 aaKnown RBP8.48□□□□□ -1.05
VPS25-203ENST00000589520 ETV3LQ6ZN32 361 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 TGIF2LXQ8IUE1 241 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 MRPL41Q8IXM3 137 aaKnown RBP8.48□□□□□ -1.05
VPS25-203ENST00000589520 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 OR10G4Q8NGN3 311 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 SFT2D1Q8WV19 159 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 ITLN2Q8WWU7 325 aaPredicted RBP8.48□□□□□ -1.05
VPS25-203ENST00000589520 ZDHHC16Q969W1 377 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 ST6GALNAC6Q969X2 333 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 NABP2Q9BQ15 211 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 PLEKHA3Q9HB20 300 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 WDR83OSQ9Y284 106 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 WASHC3Q9Y3C0 194 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 PLCE1Q9P212 2302 aa8.48□□□□□ -1.05
VPS25-203ENST00000589520 COL6A6A6NMZ7 2263 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms