RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 C3orf18Q9UK00 162 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 DKKL1Q9UK85 242 aa1.21□□□□□ -2.22
PPP4R1-227ENST00000583988 PTPRBP23467 1997 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 SMARCA4P51532 1647 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 A0A1B0GVG6 124 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 DISC1C4P0D8 188 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 M0R036 132 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 KLRC4O43908 158 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 DCTN3O75935 186 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CALB1P05937 261 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 ZNF705DP0CH99 300 aaPredicted RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 ZNF705BP0CI00 300 aaPredicted RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 RPL12P30050 165 aaKnown RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CA5AP35218 305 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 ANP32AP39687 249 aaKnown RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CDK9P50750 372 aaKnown RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 UBE2IP63279 158 aaKnown RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CLVS2Q5SYC1 327 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CCDC122Q5T0U0 273 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 Q6ZSA8 131 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 GPHB5Q86YW7 130 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 C10orf67Q8IYJ2 551 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 HAVCR2Q8TDQ0 301 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 RAB8BQ92930 207 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 NMNAT3Q96T66 252 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 LSM5Q9Y4Y9 91 aaKnown RBP1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 CPAMD8Q8IZJ3 1885 aa1.2□□□□□ -2.22
PPP4R1-227ENST00000583988 A0A0J9YW62 118 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 A0A1B0GV50 99 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 RFPL4AA6NLU0 287 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 RFPL4AL1F8VTS6 287 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 KCNK1O00180 336 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 HLA-DRAP01903 254 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 SERPINA7P05543 415 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 RPS12P25398 132 aaKnown RBP1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 CEBPGP53567 150 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 TPI1P60174 286 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 HIST1H4AP62805 103 aaKnown RBP1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 JOSD1Q15040 202 aaPredicted RBP1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 RSU1Q15404 277 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 COQ5Q5HYK3 327 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 C1orf195Q5TG92 126 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 CD200R1LQ6Q8B3 271 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 SBSNQ6UWP8 590 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 DYNAPQ8N1N2 210 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 TMEM161BQ8NDZ6 487 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 OR1L8Q8NGR8 309 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 OPTNQ96CV9 577 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 LAMB2P55268 1798 aa1.19□□□□□ -2.22
PPP4R1-227ENST00000583988 FN1P02751 2386 aaKnown RBP1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 IGHV1-69-2A0A0G2JMI3 117 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 C21orf140B9A014 251 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 GOLGA6L19H0YKK7 550 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 E2F6O75461 281 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 CCR7P32248 378 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 MAGEA12P43365 314 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 SLCO1A2P46721 670 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 CAV1Q03135 178 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 FABP9Q0Z7S8 132 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 LRRC75BQ2VPJ9 315 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 GID4Q8IVV7 300 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 PTH2Q96A98 100 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 GNPNAT1Q96EK6 184 aaPredicted RBP1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 DIRAS2Q96HU8 199 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 MRPL32Q9BYC8 188 aaKnown RBP1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 AK3Q9UIJ7 227 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 GUCA1BQ9UMX6 200 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 TIMM9Q9Y5J7 89 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 KIF15Q9NS87 1388 aa1.18□□□□□ -2.22
PPP4R1-227ENST00000583988 EVC2Q86UK5 1308 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 TMED7-TICAM2A0A0A6YYA0 188 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 A8MUN3 132 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 TGOLN2O43493 480 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 CREBL2O60519 120 aaPredicted RBP1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 IFNA5P01569 189 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 TNNC2P02585 160 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 FAM228BP0C875 321 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 AKR1C3P42330 323 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 HAAOP46952 286 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 MARCKSL1P49006 195 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 EVX1P49640 407 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 NKX2-5P52952 324 aaPredicted RBP1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 NAA20P61599 178 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 EMX1Q04741 257 aaPredicted RBP1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 LRRC28Q86X40 367 aaPredicted RBP1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 SLC22A24Q8N4F4 322 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 GPR32P1Q8NGA4 272 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 OR2T27Q8NH04 317 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 RAB2BQ8WUD1 216 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 VCX3BQ9H321 246 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 HRASLSQ9HDD0 168 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 GPR84Q9NQS5 396 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 UBAP1Q9NZ09 502 aa1.17□□□□□ -2.22
PPP4R1-227ENST00000583988 RP1L1Q8IWN7 2480 aaPredicted RBP1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 PRRC2BQ5JSZ5 2229 aaKnown RBP1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 MYH11P35749 1972 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 IGHV1-18A0A0C4DH31 117 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 OR4C45A6NMZ5 311 aa1.16□□□□□ -2.22
PPP4R1-227ENST00000583988 COX7A2LO14548 114 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms