RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR2A7Q96R45 310 aa13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 NMES1Q9C002 83 aa13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RANBP3Q9H6Z4 567 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 KIAA1456Q9P272 454 aa13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SVEP1Q4LDE5 3571 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 C13orf42A0A1B0GVH6 325 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RRHO14718 337 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 PITX3O75364 302 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SIX6O95475 246 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CRYGBP07316 175 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR9G9P0C7N8 305 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CNTFRP26992 372 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RAP2BP61225 183 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CYCSP99999 105 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 Q6YL49 198 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 C16orf82Q7Z2V1 217 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CACFD1Q9UGQ2 172 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 PITPNC1Q9UKF7 332 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SONP18583 2426 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 HIVEP2P31629 2446 aa13.36□□□□□ -0.27
CDK5RAP3-215ENST00000579780 A6NDX4 124 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 BTBD17A6NE02 478 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 FAM90A26D6RGX4 464 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 UPK2O00526 184 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SNAPC5O75971 98 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR2F2O95006 317 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 IER3P46695 156 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CD83Q01151 205 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RELBQ01201 579 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 HNF4GQ14541 408 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 IZUMO4Q1ZYL8 232 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 Q6ZRM9 215 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR4D5Q8NGN0 318 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SSMEM1Q8WWF3 244 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RBM14Q96PK6 669 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SLC25A33Q9BSK2 321 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 METTL1Q9UBP6 276 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 PRNDQ9UKY0 176 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 FOXA2Q9Y261 457 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SIGLEC9Q9Y336 463 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 MOB4Q9Y3A3 225 aa13.35□□□□□ -0.27
CDK5RAP3-215ENST00000579780 FGF16O43320 207 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CCNKO75909 580 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 SRD5A1P18405 259 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 F2RL1P55085 397 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR2B8PP59922 312 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 RPL8P62917 257 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 IL15RAQ13261 267 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 C5orf64Q2M2E5 130 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 TMEM86BQ8N661 226 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 OR1S1Q8NH92 325 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 ST6GAL2Q96JF0 529 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 FYTTD1Q96QD9 318 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CHIAQ9BZP6 476 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 TPSG1Q9NRR2 321 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 PLSCR3Q9NRY6 295 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 TMEM14BQ9NUH8 114 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 POMT1Q9Y6A1 747 aa13.34□□□□□ -0.27
CDK5RAP3-215ENST00000579780 TRAV3A0A0B4J244 114 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 IGHV4-59P01825 116 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MAS1LP35410 378 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PDLIM3Q53GG5 364 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PPP1R27Q86WC6 154 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TCTE3Q8IZS6 198 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 Q8N9W7 124 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 FBXL15Q9H469 300 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RANGRFQ9HD47 186 aaPredicted RBP13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ZFP57Q9NU63 452 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 FKBP11Q9NYL4 201 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.28
CDK5RAP3-215ENST00000579780 F8P00451 2351 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 NCBP2LA6PVI3 153 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 M0QZK8 103 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 NKX2-1P43699 371 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PLGLAQ15195 96 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PRSS8Q16651 343 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 MRGPRG-AS1Q2M3A8 158 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 OR5B3Q8NH48 314 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 OR52E5Q8NH55 327 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 PPP1R1CQ8WVI7 109 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 QTRT1Q9BXR0 403 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 GSX1Q9H4S2 264 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 GSKIPQ9P0R6 139 aa13.32□□□□□ -0.28
CDK5RAP3-215ENST00000579780 HSPB7Q9UBY9 170 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms