RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 IGKV1-39P01597 117 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 IGKV1D-39P04432 117 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 OR2B8PP59922 312 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 IZUMO4Q1ZYL8 232 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 ZNF585BQ52M93 769 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 CT45A1Q5HYN5 189 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 RBMS3Q6XE24 437 aaKnown RBP16.61■□□□□ 0.25
SMG8-203ENST00000578922 THNSL2Q86YJ6 484 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 ZNF295-AS1Q8N0V1 137 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 CT45A3Q8NHU0 189 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 NANPQ8TBE9 248 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 GAL3ST2Q9H3Q3 398 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 ZNRD1Q9P1U0 126 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 LOC102723971A0A1B0GUV8 181 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 NXPH3O95157 252 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 EIF4EBP1Q13541 118 aaPredicted RBP16.61■□□□□ 0.25
SMG8-203ENST00000578922 CYB561D1Q8N8Q1 229 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 ZBTB34Q8NCN2 500 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 PARD6GQ9BYG4 376 aaPredicted RBP16.61■□□□□ 0.25
SMG8-203ENST00000578922 IFI27L2Q9H2X8 130 aa16.61■□□□□ 0.25
SMG8-203ENST00000578922 LINC00473A8K010 186 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 RNF212BA8MTL3 300 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 PROP1O75360 226 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 CLDN1O95832 211 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 HBG1P69891 147 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 HBG2P69892 147 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 DLK1P80370 383 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 SERF2P84101 59 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 ZNF816Q0VGE8 651 aaPredicted RBP16.6■□□□□ 0.25
SMG8-203ENST00000578922 UBR5O95071 2799 aaPredicted RBP16.6■□□□□ 0.25
SMG8-203ENST00000578922 FAM208BQ5VWN6 2430 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 C17orf98A8MV24 154 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 NQO2P16083 231 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 MBD3L1Q8WWY6 194 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 TMPRSS5Q9H3S3 457 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 CACNG5Q9UF02 275 aa16.6■□□□□ 0.25
SMG8-203ENST00000578922 MALRD1Q5VYJ5 2156 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 LRRK2Q5S007 2527 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 M0R1X1 148 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMG8-203ENST00000578922 Q6ZRM9 215 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 C1orf229Q6ZS94 237 aaPredicted RBP16.59■□□□□ 0.25
SMG8-203ENST00000578922 RAB1CQ92928 201 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 TIMD4Q96H15 378 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 LINC00574Q9H8X3 128 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 PSENENQ9NZ42 101 aa16.59■□□□□ 0.25
SMG8-203ENST00000578922 RPUSD1Q9UJJ7 312 aaKnown RBP16.59■□□□□ 0.25
SMG8-203ENST00000578922 FAM90A26D6RGX4 464 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 PNRC1Q12796 327 aaPredicted RBP16.58■□□□□ 0.25
SMG8-203ENST00000578922 CATR1Q13166 79 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 ZNF841Q6ZN19 808 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 SLC16A13Q7RTY0 426 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 LYG1Q8N1E2 194 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 DOCK11Q5JSL3 2073 aa16.58■□□□□ 0.25
SMG8-203ENST00000578922 RPS10P46783 165 aaKnown RBP16.58■□□□□ 0.24
SMG8-203ENST00000578922 BRWD1-AS2P59051 145 aa16.58■□□□□ 0.24
SMG8-203ENST00000578922 TMEM267Q0VDI3 215 aaPredicted RBP16.58■□□□□ 0.24
SMG8-203ENST00000578922 ZNF525Q8N782 197 aa16.58■□□□□ 0.24
SMG8-203ENST00000578922 H3BP45 60 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 IGKV1-5P01602 117 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 FABP1P07148 127 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 CEBPGP53567 150 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 ELOBQ15370 118 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 NCR3LG1Q68D85 454 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 PINX1Q96BK5 328 aaKnown RBP16.57■□□□□ 0.24
SMG8-203ENST00000578922 P2RX4Q99571 388 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 CHODLQ9H9P2 273 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 RPRMQ9NS64 109 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 CHD6Q8TD26 2715 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 TACC2O95359 2948 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 SAA2-SAA4A0A096LPE2 208 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 A1L4Q6 167 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 SAA2P0DJI9 122 aaPredicted RBP16.57■□□□□ 0.24
SMG8-203ENST00000578922 MRPS11P82912 194 aaKnown RBP16.57■□□□□ 0.24
SMG8-203ENST00000578922 PMS2P11Q13670 270 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 KIAA0141Q14154 515 aaPredicted RBP16.57■□□□□ 0.24
SMG8-203ENST00000578922 LRRC75BQ2VPJ9 315 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 ZNF439Q8NDP4 499 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 OR51M1Q9H341 326 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 NIT2Q9NQR4 276 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 TMEM242Q9NWH2 141 aa16.57■□□□□ 0.24
SMG8-203ENST00000578922 S1PR2O95136 353 aa16.56■□□□□ 0.24
SMG8-203ENST00000578922 DUTP33316 252 aaKnown RBP16.56■□□□□ 0.24
SMG8-203ENST00000578922 RAB7AP51149 207 aa16.56■□□□□ 0.24
SMG8-203ENST00000578922 OR8B3Q8NGG8 313 aa16.56■□□□□ 0.24
SMG8-203ENST00000578922 OR8B2Q96RD0 313 aa16.56■□□□□ 0.24
SMG8-203ENST00000578922 HSD17B10Q99714 261 aaKnown RBP16.56■□□□□ 0.24
SMG8-203ENST00000578922 CRYBG3Q68DQ2 2970 aa16.56■□□□□ 0.24
SMG8-203ENST00000578922 ZNF727A8MUV8 499 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 CLN5O75503 358 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 KRASP01116 189 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 BCL2P10415 239 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 HOXA5P20719 270 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 S100PP25815 95 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 DLX1P56177 255 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 PRB3Q04118 309 aaPredicted RBP16.55■□□□□ 0.24
SMG8-203ENST00000578922 MSMO1Q15800 293 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 TMEM155Q4W5P6 130 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 ZNF787Q6DD87 383 aa16.55■□□□□ 0.24
SMG8-203ENST00000578922 ZNF66Q6ZN08 573 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms