RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NFYBP25208 207 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 UCP1P25874 307 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 IER3P46695 156 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OR3A4PP47883 348 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 CSNK1A1P48729 337 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF506Q5JVG8 444 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SHISA6Q6ZSJ9 500 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OR8U1Q8NH10 309 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 OR51F2Q8NH61 342 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 SLC22A8Q8TCC7 542 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 BTF3L4Q96K17 158 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF2Q9BSG1 426 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 NICN1Q9BSH3 213 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ADAT1Q9BUB4 502 aaKnown RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 EIF5A2Q9GZV4 153 aaKnown RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM231Q9H6L2 316 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF286AQ9HBT8 521 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 GSKIPQ9P0R6 139 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 MIOXQ9UGB7 285 aa3.36□□□□□ -1.87
LINC00561-201ENST00000565815 RP1L1Q8IWN7 2480 aaPredicted RBP3.36□□□□□ -1.87
LINC00561-201ENST00000565815 LINC00587B1AMM8 73 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RPL36A-HNRNPH2H7BZ11 118 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MPZL1O95297 269 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PRH1P02810 166 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 OR8U8P0C7N1 319 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 OR5H8P0DN80 308 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 S100GP29377 79 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ID1P41134 155 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 FMODQ06828 376 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 KRTAP1-1Q07627 177 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PLPPR5Q32ZL2 321 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 SLC22A6Q4U2R8 563 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PDLIM3Q53GG5 364 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ADAM5Q6NVV9 412 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 FBXW12Q6X9E4 464 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM104Q8NE00 496 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 OR4D5Q8NGN0 318 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RNASE11Q8TAA1 199 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TSLPQ969D9 159 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM54Q969K7 222 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 CPNE4Q96A23 557 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MUCL1Q96DR8 90 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PFDN5Q99471 154 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 P2RX4Q99571 388 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 SSX3Q99909 188 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ST6GALNAC5Q9BVH7 336 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PARD6GQ9BYG4 376 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PLEKHJ1Q9NW61 149 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 MMP24Q9Y5R2 645 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ATMQ13315 3056 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 GTF3C1Q12789 2109 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 APCP25054 2843 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RBFOX3A6NFN3 312 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PPIHO43447 177 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 CLN5O75503 358 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 SLC25A16P16260 332 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 HERV-K104P61576 105 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF616Q08AN1 781 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 FOXF1Q12946 379 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 IL24Q13007 206 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TMPPEQ6ZT21 453 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PRSS58Q8IYP2 241 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 SAXO1Q8IYX7 474 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PRR22Q8IZ63 422 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RTN4IP1Q8WWV3 396 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 GTF3AQ92664 365 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TVP23CQ96ET8 276 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM56Q96MV1 263 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PAPOLGQ9BWT3 736 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TTTY12Q9BZ98 90 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 UFSP2Q9NUQ7 469 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 DKKL1Q9UK85 242 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TCF19Q9Y242 345 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM56-RWDD3S4R434 201 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 IGKV1-9A0A0C4DH69 117 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 GJE1A6NN92 205 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 H3BSH0 61 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 TP53I11O14683 189 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 SOX15O60248 233 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 DIRAS3O95661 229 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PTBP3O95758 552 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 IFNA1P01562 189 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF17P17021 662 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RND2P52198 227 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 PIGPP57054 158 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RPS23P62266 143 aaKnown RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 H3F3AP84243 136 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 DEFA6Q01524 100 aa3.35□□□□□ -1.87
LINC00561-201ENST00000565815 LOXL1Q08397 574 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 KIAA0141Q14154 515 aaPredicted RBP3.35□□□□□ -1.87
LINC00561-201ENST00000565815 RAB35Q15286 201 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms