RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CUL9Q8IWT3 2517 aa2.55□□□□□ -2
LINC00560-201ENST00000564593 NUP210LQ5VU65 1888 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TMEM131Q92545 1883 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 IGKV1D-17A0A075B6S4 117 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 A0A0G2JMP0 313 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 A0A0X1KG70 313 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 FAM240AA0A1B0GVK7 77 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TRDV1A0A1B0GX56 115 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TRAPPC13A5PLN9 417 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 FABP12A6NFH5 140 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 OR5K4A6NMS3 321 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 MKRN2OSH3BPM6 223 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 HMGN4O00479 90 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 PDCD5O14737 125 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 GATCO43716 136 aaKnown RBP2.54□□□□□ -2
LINC00560-201ENST00000564593 NDUFS5O43920 106 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 ALOX12BO75342 701 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 DHFRP00374 187 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 IGKV1-17P01599 117 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 PAX6P26367 422 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 ERP29P30040 261 aaKnown RBP2.54□□□□□ -2
LINC00560-201ENST00000564593 OR1E2P47887 323 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 PSMB2P49721 201 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 EMP2P54851 167 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 GRB2P62993 217 aaKnown RBP2.54□□□□□ -2
LINC00560-201ENST00000564593 DEFB103AP81534 67 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 BIKQ13323 160 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TPBGQ13641 420 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CST6Q15828 149 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TNXAQ16473 311 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 PYDC2Q56P42 97 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TTC32Q5I0X7 151 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 LAIR2Q6ISS4 152 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 SLC48A1Q6P1K1 146 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 ZNF767PQ75MW2 155 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 GALNT10Q86SR1 603 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 LYPD1Q8N2G4 141 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CDRT4Q8N9R6 151 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 LGALS14Q8TCE9 139 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 DIRAS2Q96HU8 199 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 OR2M4Q96R27 311 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 STACQ99469 402 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CTRCQ99895 268 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 NIPSNAP1Q9BPW8 284 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 C20orf144Q9BQM9 153 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 UTP23Q9BRU9 249 aaKnown RBP2.54□□□□□ -2
LINC00560-201ENST00000564593 OR51I1Q9H343 314 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CA10Q9NS85 328 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 IMP3Q9NV31 184 aaKnown RBP2.54□□□□□ -2
LINC00560-201ENST00000564593 TVP23BQ9NYZ1 205 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 DNAJC27Q9NZQ0 273 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CLEC2DQ9UHP7 191 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 RAB22AQ9UL26 194 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 CCL26Q9Y258 94 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 COL4A2P08572 1712 aa2.54□□□□□ -2
LINC00560-201ENST00000564593 TRAV8-7A0A075B6U6 113 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 IGHV3OR16-8A0A075B7F1 116 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 C2orf74A8MZ97 194 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 PRAMEF26H0Y7S4 382 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 SOX14O95416 240 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 SOD1P00441 154 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 HMGN2P05204 90 aaKnown RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 OR12D1P0DN82 309 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 IL7P13232 177 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 HLA-DMAP28067 261 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 FAUP35544 74 aaKnown RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 MPV17P39210 176 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 MRPS10P82664 201 aaKnown RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 BCL2A1Q16548 175 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 TAL2Q16559 108 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 LRRC26Q2I0M4 334 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 CDNFQ49AH0 187 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 HBMQ6B0K9 141 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 CD200R1LQ6Q8B3 271 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 LRRN1Q6UXK5 716 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 ZNF550Q7Z398 422 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 PLCZ1Q86YW0 608 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 TCTE3Q8IZS6 198 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 C10orf111Q8N326 155 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 Q8N402 240 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 ACBD7Q8N6N7 88 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 ATP6V1C2Q8NEY4 427 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 OR4C6Q8NH72 309 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 NT5CQ8TCD5 201 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 KLF14Q8TD94 323 aaPredicted RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 ZNF721Q8TF20 911 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 TMEM239Q8WW34 195 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 LCN9Q8WX39 176 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 ASB13Q8WXK3 278 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 MS4A6EQ96DS6 147 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 PRAP1Q96NZ9 151 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 OR7D2Q96RA2 312 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 POTEKPQ9BYX7 375 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 SLC19A3Q9BZV2 496 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 SRRQ9GZT4 340 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 OR51E2Q9H255 320 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 SYT4Q9H2B2 425 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 LINC00574Q9H8X3 128 aa2.53□□□□□ -2
LINC00560-201ENST00000564593 TXNL4BQ9NX01 149 aaKnown RBP2.53□□□□□ -2
LINC00560-201ENST00000564593 SLC7A11Q9UPY5 501 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms