RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ZNF695Q8IW36 515 aa10.38□□□□□ -0.75
SPG7-209ENST00000564047 PPP1R1CQ8WVI7 109 aa10.38□□□□□ -0.75
SPG7-209ENST00000564047 PLEKHA2Q9HB19 425 aa10.38□□□□□ -0.75
SPG7-209ENST00000564047 PRR13Q9NZ81 148 aa10.38□□□□□ -0.75
SPG7-209ENST00000564047 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 DUXBA0A1W2PPF3 345 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 KANTRA0A1W2PQU2 76 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 ATG12O94817 140 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 VENTXO95231 258 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 CRYZL1O95825 349 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 PAX6P26367 422 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 SRP14P37108 136 aaKnown RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 EBI3Q14213 229 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 AANATQ16613 207 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 TMEM177Q53S58 311 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 TMEM268Q5VZI3 342 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 THOC7Q6I9Y2 204 aaKnown RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 COMMD7Q86VX2 200 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 THNSL2Q86YJ6 484 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 SELENOHQ8IZQ5 122 aaKnown RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 OR4C13Q8NGP0 309 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 OSR1Q8TAX0 266 aaPredicted RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 RBPMSQ93062 196 aaKnown RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
SPG7-209ENST00000564047 PHYHIPLQ96FC7 376 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 RNF5Q99942 180 aa10.37□□□□□ -0.75
SPG7-209ENST00000564047 RNF222A6NCQ9 220 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 S1PR2O95136 353 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 IGKV1-39P01597 117 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 IGKV1-16P04430 117 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 IGKV1D-39P04432 117 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 PET100P0DJ07 73 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 BCL6BQ8N143 479 aaPredicted RBP10.36□□□□□ -0.75
SPG7-209ENST00000564047 SEC22AQ96IW7 307 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 C2orf50Q96LR7 162 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 AIFM2Q9BRQ8 373 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
SPG7-209ENST00000564047 SOX21Q9Y651 276 aaPredicted RBP10.36□□□□□ -0.75
SPG7-209ENST00000564047 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 FAM25EA8MYX2 175 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 MOSP00540 346 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 HRASP01112 189 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 IGKV1D-33P01593 117 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 IGKV1-33P01594 117 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 SNRNP70P08621 437 aaKnown RBP10.35□□□□□ -0.75
SPG7-209ENST00000564047 NMBP08949 121 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 FAM106CPP0CH98 169 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 NQO2P16083 231 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 VDAC1P21796 283 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 LGALS7P47929 136 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
SPG7-209ENST00000564047 IL15RAQ13261 267 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 LRRC75BQ2VPJ9 315 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 DEFB112Q30KQ8 113 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 IL17RELQ6ZVW7 336 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
SPG7-209ENST00000564047 OR2T10Q8NGZ9 312 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 R3HDM4Q96D70 268 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
SPG7-209ENST00000564047 HARBI1Q96MB7 349 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 PRDM13Q9H4Q3 707 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 MBD2Q9UBB5 411 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
SPG7-209ENST00000564047 C13orf42A0A1B0GVH6 325 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 MARCH11A6NNE9 402 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 SHOXO15266 292 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 KRASP01116 189 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 IFNA21P01568 189 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 ERVK-16P61578 105 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 SCGB2A2Q13296 93 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 FAM219AQ8IW50 185 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 STOML3Q8TAV4 291 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
SPG7-209ENST00000564047 RRNAD1Q96FB5 475 aaKnown RBP10.34□□□□□ -0.75
SPG7-209ENST00000564047 TSNAXQ99598 290 aaKnown RBP10.34□□□□□ -0.75
SPG7-209ENST00000564047 SSX3Q99909 188 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 ARPC5LQ9BPX5 153 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 CDC42EP3Q9UKI2 254 aa10.34□□□□□ -0.75
SPG7-209ENST00000564047 MDFIC2A0A1B0GVS7 189 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
SPG7-209ENST00000564047 ADAP1O75689 374 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 SPDEFO95238 335 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 IGKV1-5P01602 117 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 HOXB5P09067 269 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 P0C879 139 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 CD24P25063 80 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 G6PCP35575 357 aa10.33□□□□□ -0.76
SPG7-209ENST00000564047 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
SPG7-209ENST00000564047 AKR1C2P52895 323 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms