RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 OR2F1Q13607 317 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 SSX2Q16385 188 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 VMA21Q3ZAQ7 101 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
TRAF3-209ENST00000560463 PDLIM3Q53GG5 364 aaPredicted RBP6.94□□□□□ -1.3
TRAF3-209ENST00000560463 LDLRAD2Q5SZI1 272 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 CYB5R2Q6BCY4 276 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 PDZD9Q8IXQ8 264 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 C9orf62Q8N4C0 152 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 TEX45Q8NA69 505 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 CFHR4Q92496 578 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 RAB40CQ96S21 281 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 OR5AC2Q9NZP5 309 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 PRNDQ9UKY0 176 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 HILPDAQ9Y5L2 63 aa6.94□□□□□ -1.3
TRAF3-209ENST00000560463 TLN2Q9Y4G6 2542 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SRRM4A7MD48 611 aaKnown RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 UPK2O00526 184 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 TIMM23O14925 209 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 CHST1O43916 411 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 GPR137BO60478 399 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 VENTXO95231 258 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SPDEFO95238 335 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SAA1P0DJI8 122 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 S100A11P31949 105 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SPCS3P61009 180 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 RPL23AP62750 156 aaKnown RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 VAMP2P63027 116 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 EBI3Q14213 229 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 IZUMO4Q1ZYL8 232 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 CXorf66Q5JRM2 361 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 LAMTOR1Q6IAA8 161 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SSX9Q7RTT3 188 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 THNSL2Q86YJ6 484 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 VKORC1L1Q8N0U8 176 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 TEX29Q8N6K0 151 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 WFDC11Q8NEX6 87 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 TMEM167AQ8TBQ9 72 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 SMIM8Q96KF7 97 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 AQP10Q96PS8 301 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 CIB3Q96Q77 187 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 MFFQ9GZY8 342 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 FOXA2Q9Y261 457 aaPredicted RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 RCL1Q9Y2P8 373 aaKnown RBP6.93□□□□□ -1.3
TRAF3-209ENST00000560463 ZNF257Q9Y2Q1 563 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 WSB1Q9Y6I7 421 aa6.93□□□□□ -1.3
TRAF3-209ENST00000560463 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 TRAV40A0A0B4J280 105 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 A0A1W2PRD5 423 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 A0A1W2PRF3 423 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 A0A1W2PRM7 423 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 RNF222A6NCQ9 220 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 SSSCA1O60232 199 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 TSC22D2O75157 780 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 SCAF4O95104 1147 aaKnown RBP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 MOSP00540 346 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 IFNA17P01571 189 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 IGLV2-23P01705 113 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 FAM106CPP0CH98 169 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 CXCL2P19875 107 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 RPL12P30050 165 aaKnown RBP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 MAS1LP35410 378 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 DYNLT3P51808 116 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 POLR2GP62487 172 aaKnown RBP eCLIP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 RPL8P62917 257 aaKnown RBP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 TMUB2Q71RG4 321 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 MMD2Q8IY49 270 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 DYNAPQ8N1N2 210 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 NPBQ8NG41 125 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 OR8H1Q8NGG4 311 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 GRPEL2Q8TAA5 225 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 AJUBAQ96IF1 538 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 SLC25A31Q9H0C2 315 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 MAGT1Q9H0U3 335 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 RBKSQ9H477 322 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 C11orf1Q9H5F2 150 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 LYRM2Q9NU23 88 aaPredicted RBP6.92□□□□□ -1.3
TRAF3-209ENST00000560463 BOLA1Q9Y3E2 137 aa6.92□□□□□ -1.3
TRAF3-209ENST00000560463 IGHV3-72A0A0B4J1Y9 119 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 TAAR5O14804 337 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 NBR2O15453 112 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 NDUFA3O95167 84 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 IGKV1D-33P01593 117 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 IGKV1-33P01594 117 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 FBP1P09467 338 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 IGHV4-38-2P0DP08 117 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 HKR1P10072 659 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
TRAF3-209ENST00000560463 HES1Q14469 280 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 PSG5Q15238 335 aa6.91□□□□□ -1.3
TRAF3-209ENST00000560463 AANATQ16613 207 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms