RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KNL1Q8NG31 2342 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 IGHV3-72A0A0B4J1Y9 119 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 LCN2P80188 198 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 IGSF11Q5DX21 431 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 KIF13BQ9NQT8 1826 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 CXorf65A6NEN9 183 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 COLCA1Q6ZS62 124 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 GLRX5Q86SX6 157 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 SGK494Q96LW2 274 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 ASCL2Q99929 193 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 TRAV9-1A0A075B6T8 112 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 LINC01590Q5TEZ4 76 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 CIARTQ8N365 385 aaPredicted RBP10.13□□□□□ -0.79
NEK9-210ENST00000557026 RAB37Q96AX2 223 aa10.13□□□□□ -0.79
NEK9-210ENST00000557026 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
NEK9-210ENST00000557026 CENPVL1A0A0U1RR11 272 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 TCRBV4S1A1TA0A5B7 111 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 TMEM250H0YL14 139 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 DRAM1Q8N682 238 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 ZNFX1Q9P2E3 1918 aaKnown RBP10.12□□□□□ -0.79
NEK9-210ENST00000557026 MEX3AA1L020 520 aaKnown RBP10.12□□□□□ -0.79
NEK9-210ENST00000557026 IL4P05112 153 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 PKIAP61925 76 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 UNC119Q13432 240 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 VENTXO95231 258 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 MFAP2P55001 183 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 HIST1H1AQ02539 215 aaPredicted RBP10.12□□□□□ -0.79
NEK9-210ENST00000557026 Q6ZS92 163 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 CRIPAKQ8N1N5 446 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 TPRX1Q8N7U7 411 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 MIXL1Q9H2W2 232 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 KCNE5Q9UJ90 142 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 CD69Q07108 199 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 SPSB3Q6PJ21 355 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 NUDT10Q8NFP7 164 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 MRAP2Q96G30 205 aa10.12□□□□□ -0.79
NEK9-210ENST00000557026 ZNF256Q9Y2P7 627 aaPredicted RBP10.12□□□□□ -0.79
NEK9-210ENST00000557026 PHOX2AO14813 284 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 RFPL3SP0C7P2 107 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 ERVK11-1P61568 191 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 PLAURQ03405 335 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 C10orf111Q8N326 155 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 OVOL1O14753 267 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
NEK9-210ENST00000557026 SSTR5P35346 364 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 LINC00114Q6XXX2 140 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 TMEM167AQ8TBQ9 72 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 FAM131CQ96AQ9 280 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 NABP2Q9BQ15 211 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 MCRIP2Q9BUT9 160 aaKnown RBP10.11□□□□□ -0.79
NEK9-210ENST00000557026 TRAV39A0A0B4J263 110 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 J3KRW8 73 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 TMEM155Q4W5P6 130 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 STHQ8IWL8 128 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 LRRC75AQ8NAA5 344 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 PSG7Q13046 419 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 INSL4Q14641 139 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 MYO16Q9Y6X6 1858 aa10.11□□□□□ -0.79
NEK9-210ENST00000557026 MBD3L4A6NDZ8 208 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 MBD3L3A6NE82 208 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 MBD3L5A6NJ08 208 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 SIGLEC5O15389 551 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 PTBP3O95758 552 aaKnown RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 AMY1AP04745 511 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 CSN3P07498 182 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 CDX1P47902 265 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 PMS2P11Q13670 270 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 UBE2V2Q15819 145 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 ZNF56Q15929 161 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 MBD3L2Q8NHZ7 208 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 ARID1BQ8NFD5 2236 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 PQLC2LA1A4F0 135 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 H3BQ15 152 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 PRSS12P56730 875 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 ZNF660Q6AZW8 331 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 IGHV3OR16-12A0A075B7B8 117 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 J3QKU1 62 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 J3QLI3 93 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 NUDT3O95989 172 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 IGHG3P01860 377 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 SRSF8Q9BRL6 282 aaKnown RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 HDHD3Q9BSH5 251 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 C12orf77C9JDV5 145 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 KLF4O43474 513 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 F12P00748 615 aaPredicted RBP10.1□□□□□ -0.79
NEK9-210ENST00000557026 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 PDZD11Q5EBL8 140 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 REC114Q7Z4M0 266 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 LINC01356Q8N9X3 169 aa10.1□□□□□ -0.79
NEK9-210ENST00000557026 DUX3Q96PT4 197 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms