RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TMEM167AQ8TBQ9 72 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 LSM10Q969L4 123 aaKnown RBP9.92□□□□□ -0.82
SHMT2-221ENST00000555773 DUX5Q96PT3 197 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 SEC22CQ9BRL7 303 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 NPFFR1Q9GZQ6 430 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 FBXL15Q9H469 300 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 TMEM140Q9NV12 185 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 TMED3Q9Y3Q3 217 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 MMP24Q9Y5R2 645 aa9.92□□□□□ -0.82
SHMT2-221ENST00000555773 UPK2O00526 184 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 CHST1O43916 411 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 SNAPC5O75971 98 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 KBTBD11O94819 623 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 HLA-DRB1P01911 266 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 AMY1AP04745 511 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 MAS1LP35410 378 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 AKR1C2P52895 323 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 PRSS8Q16651 343 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 TATDN3Q17R31 274 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 ZNF562Q6V9R5 426 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 SSX9Q7RTT3 188 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 MMD2Q8IY49 270 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 SLC35G3Q8N808 338 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 OR52B4Q8NGK2 314 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 PRSS22Q9GZN4 317 aa9.91□□□□□ -0.82
SHMT2-221ENST00000555773 RANBP3Q9H6Z4 567 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-221ENST00000555773 C7orf66A4D0T2 115 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 FAM181BA6NEQ2 426 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 ACTL6BO94805 426 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 IFNA21P01568 189 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 P0C879 139 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 SLC25A6P12236 298 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 RPL8P62917 257 aaKnown RBP9.9□□□□□ -0.82
SHMT2-221ENST00000555773 LYZL2Q7Z4W2 148 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 RNASE11Q8TAA1 199 aaKnown RBP9.9□□□□□ -0.82
SHMT2-221ENST00000555773 FKBP11Q9NYL4 201 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 PRR13Q9NZ81 148 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 CACFD1Q9UGQ2 172 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 PRNDQ9UKY0 176 aa9.9□□□□□ -0.82
SHMT2-221ENST00000555773 SETD2Q9BYW2 2564 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-221ENST00000555773 A0A1B0GU03 582 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 DBX1A6NMT0 343 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 FCN1O00602 326 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 BLCAPP62952 87 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 CX3CL1P78423 397 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 RELBQ01201 579 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 NMSQ5H8A3 153 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 Q8N2B8 174 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 UXS1Q8NBZ7 420 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 GPR146Q96CH1 333 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 CLCC1Q96S66 551 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 OR51J1Q9H342 316 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-221ENST00000555773 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-221ENST00000555773 COA4Q9NYJ1 87 aa9.89□□□□□ -0.83
SHMT2-221ENST00000555773 A0A0B4J293 547 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 KCNAB3O43448 404 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 TSPAN9O75954 239 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 CNIH1O95406 144 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 IGHG2P01859 326 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 HOXB5P09067 269 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 HLA-GP17693 338 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 PJVKQ0ZLH3 352 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 MRGPRG-AS1Q2M3A8 158 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 GGNBP1Q5YKI7 109 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 ZNF429Q86V71 674 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 FOXRED2Q8IWF2 684 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 SPIN2AQ99865 258 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 SPIN2BQ9BPZ2 258 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 ALG5Q9Y673 324 aa9.88□□□□□ -0.83
SHMT2-221ENST00000555773 IGHV7-81A0A0B4J1V7 117 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 TRAV3A0A0B4J244 114 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 A0A0G2JRQ6 117 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 C15orf61A6NNL5 157 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 SSNA1O43805 119 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 RBMXL2O75526 392 aaKnown RBP9.87□□□□□ -0.83
SHMT2-221ENST00000555773 NDUFA7O95182 113 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 CA2P00918 260 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 OR9G9P0C7N8 305 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 SULT1A3P0DMM9 295 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 SULT1A4P0DMN0 295 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 FXYD3Q14802 87 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 AARDQ4LEZ3 155 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 C9orf152Q5JTZ5 239 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 Q6ZRM9 215 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 OR5B3Q8NH48 314 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 COMMD5Q9GZQ3 224 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 C16orf95Q9H693 158 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 TMEM14BQ9NUH8 114 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 FOXA2Q9Y261 457 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-221ENST00000555773 ZNF257Q9Y2Q1 563 aa9.87□□□□□ -0.83
SHMT2-221ENST00000555773 ADAP1O75689 374 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 IGF1P05019 195 aa9.86□□□□□ -0.83
SHMT2-221ENST00000555773 COMPP49747 757 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-221ENST00000555773 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms